Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 Stau2-216ENSMUST00000162627 2773 ntTSL 5 BASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 Gm12047-201ENSMUST00000117561 944 ntBASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 Mrip-ps-201ENSMUST00000184613 940 ntBASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 Gm21083-201ENSMUST00000188807 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 Gm43450-201ENSMUST00000202611 632 ntTSL 3 BASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 Cst13-201ENSMUST00000046589 783 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 Saxo2-205ENSMUST00000207693 1927 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC10.9□□□□□ -0.66
Vps13aQ5H8C4 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Vps13aQ5H8C4 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Vps13aQ5H8C4 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC10.9□□□□□ -0.67
Vps13aQ5H8C4 Prdx3-201ENSMUST00000025961 1478 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Vps13aQ5H8C4 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Vps13aQ5H8C4 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Vps13aQ5H8C4 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.67
Vps13aQ5H8C4 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Vps13aQ5H8C4 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
Vps13aQ5H8C4 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Vps13aQ5H8C4 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Gm6517-201ENSMUST00000121056 511 ntBASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 n-R5s154-201ENSMUST00000122513 108 ntBASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Snrp1c-ps1-201ENSMUST00000205464 474 ntBASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 AC165260.3-201ENSMUST00000225101 665 ntBASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 AU015228-201ENSMUST00000121103 1320 ntBASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Dtymk-203ENSMUST00000112893 1040 ntTSL 2 BASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Tead1-211ENSMUST00000170352 1218 ntTSL 5 BASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Ppp1r2-ps1-201ENSMUST00000178232 621 ntBASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Ppp1r2-ps6-201ENSMUST00000179333 621 ntBASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Gm44460-201ENSMUST00000196179 129 ntBASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 AC165249.1-203ENSMUST00000219976 392 ntTSL 2 BASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Olfr403-201ENSMUST00000076675 942 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Olfr43-201ENSMUST00000078936 1092 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Tcl1b4-202ENSMUST00000222867 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 AC148324.1-201ENSMUST00000219034 4240 ntBASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Gm42833-201ENSMUST00000196019 2124 ntBASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Gm12947-201ENSMUST00000116114 420 ntBASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Gm14650-201ENSMUST00000120400 889 ntBASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Gm15793-201ENSMUST00000121857 495 ntBASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Gm13191-201ENSMUST00000136489 416 ntTSL 3 BASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Gm14344-201ENSMUST00000139338 580 ntTSL 3 BASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Gm5873-201ENSMUST00000177157 1066 ntBASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Gm17797-201ENSMUST00000182175 997 ntBASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Gm42952-204ENSMUST00000198572 408 ntTSL 3 BASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Gm9273-201ENSMUST00000200606 715 ntBASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Btg4-202ENSMUST00000213117 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Gm8960-201ENSMUST00000219787 788 ntBASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Gm18783-201ENSMUST00000220465 1151 ntBASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Gm35298-201ENSMUST00000222719 430 ntTSL 5 BASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Rbm10-204ENSMUST00000115374 3564 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vps13aQ5H8C4 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Vps13aQ5H8C4 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Vps13aQ5H8C4 Gm43174-201ENSMUST00000195914 2445 ntBASIC10.88□□□□□ -0.67
Vps13aQ5H8C4 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Vps13aQ5H8C4 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Vps13aQ5H8C4 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Vps13aQ5H8C4 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Vps13aQ5H8C4 Gm12481-201ENSMUST00000102482 297 ntBASIC10.88□□□□□ -0.67
Vps13aQ5H8C4 Gm13543-201ENSMUST00000121230 796 ntBASIC10.88□□□□□ -0.67
Vps13aQ5H8C4 Gm12037-201ENSMUST00000123160 308 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Vps13aQ5H8C4 1700030A11Rik-201ENSMUST00000125317 888 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Vps13aQ5H8C4 Gm5342-201ENSMUST00000181982 1003 ntBASIC10.88□□□□□ -0.67
Vps13aQ5H8C4 Gm3052-201ENSMUST00000186409 829 ntBASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms