Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 AC126257.2-201ENSMUST00000215507 2300 ntBASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 Gm9353-201ENSMUST00000200472 604 ntBASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 AC129308.3-201ENSMUST00000225652 524 ntBASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 Gm43127-201ENSMUST00000195890 2789 ntBASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 Gm9915-201ENSMUST00000066196 1383 ntBASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rc3h1Q4VGL6 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Rc3h1Q4VGL6 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Rc3h1Q4VGL6 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Rc3h1Q4VGL6 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rc3h1Q4VGL6 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rc3h1Q4VGL6 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Rc3h1Q4VGL6 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rc3h1Q4VGL6 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rc3h1Q4VGL6 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rc3h1Q4VGL6 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rc3h1Q4VGL6 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rc3h1Q4VGL6 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rc3h1Q4VGL6 Gm9133-201ENSMUST00000118289 540 ntBASIC13.14□□□□□ -0.31
Rc3h1Q4VGL6 Gm8302-201ENSMUST00000119217 852 ntBASIC13.14□□□□□ -0.31
Rc3h1Q4VGL6 Gm15197-201ENSMUST00000120526 478 ntBASIC13.14□□□□□ -0.31
Rc3h1Q4VGL6 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC13.14□□□□□ -0.31
Rc3h1Q4VGL6 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC13.14□□□□□ -0.31
Rc3h1Q4VGL6 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC13.14□□□□□ -0.31
Rc3h1Q4VGL6 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rc3h1Q4VGL6 Gm4895-201ENSMUST00000181646 1137 ntBASIC13.14□□□□□ -0.31
Rc3h1Q4VGL6 Gm9884-201ENSMUST00000194343 1222 ntBASIC13.14□□□□□ -0.31
Rc3h1Q4VGL6 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rc3h1Q4VGL6 Gm18968-201ENSMUST00000221319 862 ntBASIC13.14□□□□□ -0.31
Rc3h1Q4VGL6 CT030653.1-201ENSMUST00000224382 1279 ntBASIC13.14□□□□□ -0.31
Rc3h1Q4VGL6 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Rc3h1Q4VGL6 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Rc3h1Q4VGL6 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rc3h1Q4VGL6 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rc3h1Q4VGL6 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rc3h1Q4VGL6 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rc3h1Q4VGL6 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rc3h1Q4VGL6 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rc3h1Q4VGL6 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rc3h1Q4VGL6 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Rc3h1Q4VGL6 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rc3h1Q4VGL6 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rc3h1Q4VGL6 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rc3h1Q4VGL6 Gm18806-201ENSMUST00000207607 1775 ntBASIC13.14□□□□□ -0.31
Rc3h1Q4VGL6 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rc3h1Q4VGL6 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rc3h1Q4VGL6 Btrc-209ENSMUST00000224478 2194 ntBASIC13.14□□□□□ -0.31
Rc3h1Q4VGL6 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rc3h1Q4VGL6 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rc3h1Q4VGL6 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rc3h1Q4VGL6 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rc3h1Q4VGL6 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rc3h1Q4VGL6 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rc3h1Q4VGL6 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rc3h1Q4VGL6 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rc3h1Q4VGL6 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rc3h1Q4VGL6 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rc3h1Q4VGL6 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rc3h1Q4VGL6 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rc3h1Q4VGL6 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rc3h1Q4VGL6 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rc3h1Q4VGL6 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Rc3h1Q4VGL6 Gm14270-201ENSMUST00000118388 846 ntBASIC13.13□□□□□ -0.31
Rc3h1Q4VGL6 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rc3h1Q4VGL6 Gm6771-201ENSMUST00000182716 1001 ntBASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms