Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx49Q4FZF3 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx49Q4FZF3 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx49Q4FZF3 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx49Q4FZF3 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx49Q4FZF3 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ddx49Q4FZF3 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx49Q4FZF3 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC13.26□□□□□ -0.29
Ddx49Q4FZF3 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx49Q4FZF3 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx49Q4FZF3 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx49Q4FZF3 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC13.26□□□□□ -0.29
Ddx49Q4FZF3 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.26□□□□□ -0.29
Ddx49Q4FZF3 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ddx49Q4FZF3 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx49Q4FZF3 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx49Q4FZF3 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC13.26□□□□□ -0.29
Ddx49Q4FZF3 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx49Q4FZF3 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC13.26□□□□□ -0.29
Ddx49Q4FZF3 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC13.26□□□□□ -0.29
Ddx49Q4FZF3 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx49Q4FZF3 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx49Q4FZF3 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx49Q4FZF3 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx49Q4FZF3 Smok4a-201ENSMUST00000074512 1455 ntBASIC13.26□□□□□ -0.29
Ddx49Q4FZF3 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx49Q4FZF3 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx49Q4FZF3 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx49Q4FZF3 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ddx49Q4FZF3 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
Ddx49Q4FZF3 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Ddx49Q4FZF3 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx49Q4FZF3 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx49Q4FZF3 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ddx49Q4FZF3 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx49Q4FZF3 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx49Q4FZF3 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx49Q4FZF3 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ddx49Q4FZF3 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ddx49Q4FZF3 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx49Q4FZF3 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx49Q4FZF3 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx49Q4FZF3 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx49Q4FZF3 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx49Q4FZF3 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC13.25□□□□□ -0.29
Ddx49Q4FZF3 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx49Q4FZF3 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx49Q4FZF3 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx49Q4FZF3 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx49Q4FZF3 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx49Q4FZF3 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx49Q4FZF3 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ddx49Q4FZF3 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Ddx49Q4FZF3 Gm8111-201ENSMUST00000117659 987 ntBASIC13.25□□□□□ -0.29
Ddx49Q4FZF3 Gm15528-201ENSMUST00000117821 864 ntBASIC13.25□□□□□ -0.29
Ddx49Q4FZF3 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Ddx49Q4FZF3 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx49Q4FZF3 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC13.25□□□□□ -0.29
Ddx49Q4FZF3 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Ddx49Q4FZF3 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Ddx49Q4FZF3 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC13.25□□□□□ -0.29
Ddx49Q4FZF3 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx49Q4FZF3 Gm5599-201ENSMUST00000209602 788 ntBASIC13.25□□□□□ -0.29
Ddx49Q4FZF3 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC13.25□□□□□ -0.29
Ddx49Q4FZF3 AC134248.1-201ENSMUST00000216113 1176 ntBASIC13.25□□□□□ -0.29
Ddx49Q4FZF3 Gm9487-201ENSMUST00000216600 472 ntBASIC13.25□□□□□ -0.29
Ddx49Q4FZF3 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx49Q4FZF3 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx49Q4FZF3 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx49Q4FZF3 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC13.25□□□□□ -0.29
Ddx49Q4FZF3 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx49Q4FZF3 AC211878.3-201ENSMUST00000222629 2018 ntBASIC13.25□□□□□ -0.29
Ddx49Q4FZF3 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Ddx49Q4FZF3 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx49Q4FZF3 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx49Q4FZF3 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx49Q4FZF3 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ddx49Q4FZF3 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx49Q4FZF3 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ddx49Q4FZF3 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx49Q4FZF3 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC13.24□□□□□ -0.29
Ddx49Q4FZF3 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Ddx49Q4FZF3 Gm38089-201ENSMUST00000193585 1514 ntBASIC13.24□□□□□ -0.29
Ddx49Q4FZF3 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx49Q4FZF3 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx49Q4FZF3 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ddx49Q4FZF3 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC13.24□□□□□ -0.29
Ddx49Q4FZF3 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC13.24□□□□□ -0.29
Ddx49Q4FZF3 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx49Q4FZF3 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx49Q4FZF3 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx49Q4FZF3 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC13.24□□□□□ -0.29
Ddx49Q4FZF3 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Ddx49Q4FZF3 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx49Q4FZF3 Gm15374-201ENSMUST00000119313 844 ntBASIC13.24□□□□□ -0.29
Ddx49Q4FZF3 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ddx49Q4FZF3 Gm12906-201ENSMUST00000154610 441 ntBASIC13.24□□□□□ -0.29
Ddx49Q4FZF3 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC13.24□□□□□ -0.29
Ddx49Q4FZF3 Gm17221-201ENSMUST00000163909 481 ntBASIC13.24□□□□□ -0.29
Ddx49Q4FZF3 Gm17073-201ENSMUST00000168069 556 ntBASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms