Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Spg11Q3UHA3 Mir8091-201ENSMUST00000183602 139 ntBASIC10.41□□□□□ -0.74
Spg11Q3UHA3 Gm28499-201ENSMUST00000191576 666 ntTSL 2 BASIC10.41□□□□□ -0.74
Spg11Q3UHA3 AC154585.1-201ENSMUST00000218917 997 ntBASIC10.41□□□□□ -0.74
Spg11Q3UHA3 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Spg11Q3UHA3 Gm25483-201ENSMUST00000083224 227 ntBASIC10.41□□□□□ -0.74
Spg11Q3UHA3 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Spg11Q3UHA3 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Spg11Q3UHA3 Tmem35b-202ENSMUST00000106097 1762 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
Spg11Q3UHA3 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Spg11Q3UHA3 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Spg11Q3UHA3 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Spg11Q3UHA3 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Spg11Q3UHA3 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Spg11Q3UHA3 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Spg11Q3UHA3 Olfr53-201ENSMUST00000084456 1328 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Spg11Q3UHA3 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC10.4□□□□□ -0.74
Spg11Q3UHA3 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Spg11Q3UHA3 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Spg11Q3UHA3 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Spg11Q3UHA3 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Spg11Q3UHA3 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Spg11Q3UHA3 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Spg11Q3UHA3 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Spg11Q3UHA3 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Spg11Q3UHA3 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Spg11Q3UHA3 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Spg11Q3UHA3 Gm22900-201ENSMUST00000104538 130 ntBASIC10.4□□□□□ -0.74
Spg11Q3UHA3 Gm13543-201ENSMUST00000121230 796 ntBASIC10.4□□□□□ -0.74
Spg11Q3UHA3 Samd13-201ENSMUST00000124931 905 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Spg11Q3UHA3 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC10.4□□□□□ -0.74
Spg11Q3UHA3 Gm20474-201ENSMUST00000180089 596 ntBASIC10.4□□□□□ -0.74
Spg11Q3UHA3 Gm17733-201ENSMUST00000181883 1048 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Spg11Q3UHA3 Gm6317-201ENSMUST00000183159 1000 ntBASIC10.4□□□□□ -0.74
Spg11Q3UHA3 2810429I04Rik-204ENSMUST00000185835 923 ntTSL 3 BASIC10.4□□□□□ -0.74
Spg11Q3UHA3 1700048F04Rik-201ENSMUST00000199057 1064 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Spg11Q3UHA3 Prss23os-203ENSMUST00000208814 975 ntTSL 5 BASIC10.4□□□□□ -0.74
Spg11Q3UHA3 Prss23os-204ENSMUST00000209064 972 ntTSL 5 BASIC10.4□□□□□ -0.74
Spg11Q3UHA3 Gm28653-202ENSMUST00000227082 521 ntBASIC10.4□□□□□ -0.74
Spg11Q3UHA3 Clpsl2-201ENSMUST00000025061 442 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Spg11Q3UHA3 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Spg11Q3UHA3 3110009E18Rik-201ENSMUST00000027637 1007 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Spg11Q3UHA3 Gm10689-201ENSMUST00000098864 432 ntBASIC10.4□□□□□ -0.74
Spg11Q3UHA3 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Spg11Q3UHA3 Gm11960-202ENSMUST00000181063 2858 ntBASIC10.4□□□□□ -0.74
Spg11Q3UHA3 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Spg11Q3UHA3 Kcnk2-209ENSMUST00000194402 1373 ntTSL 5 BASIC10.4□□□□□ -0.74
Spg11Q3UHA3 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Spg11Q3UHA3 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Spg11Q3UHA3 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Spg11Q3UHA3 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.75
Spg11Q3UHA3 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Spg11Q3UHA3 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Spg11Q3UHA3 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.75
Spg11Q3UHA3 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Spg11Q3UHA3 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Spg11Q3UHA3 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Spg11Q3UHA3 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.75
Spg11Q3UHA3 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Spg11Q3UHA3 Mir9-3hg-202ENSMUST00000181511 3412 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Spg11Q3UHA3 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Gm9133-201ENSMUST00000118289 540 ntBASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Gm15637-201ENSMUST00000135544 817 ntTSL 3 BASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Gm15419-201ENSMUST00000148654 743 ntTSL 3 BASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Ift172-206ENSMUST00000201809 405 ntTSL 5 BASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Gm7880-201ENSMUST00000203748 871 ntBASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Gm3198-201ENSMUST00000208725 1026 ntBASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Spg11Q3UHA3 AC122459.4-201ENSMUST00000228654 551 ntBASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Krtap21-1-201ENSMUST00000078422 748 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Spg11Q3UHA3 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Cd14-201ENSMUST00000061829 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Rhox3f-201ENSMUST00000115172 833 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Pabpn1-203ENSMUST00000139985 903 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Tnni1-208ENSMUST00000154463 749 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Gm16165-201ENSMUST00000160140 795 ntBASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Gm12424-201ENSMUST00000179673 447 ntBASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Rhox3f-203ENSMUST00000184451 1008 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Spg11Q3UHA3 AC159002.1-201ENSMUST00000226714 924 ntBASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Spg11Q3UHA3 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms