Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cul4aQ3TCH7 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cul4aQ3TCH7 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cul4aQ3TCH7 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC11.88□□□□□ -0.51
Cul4aQ3TCH7 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.88□□□□□ -0.51
Cul4aQ3TCH7 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cul4aQ3TCH7 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cul4aQ3TCH7 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cul4aQ3TCH7 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC11.88□□□□□ -0.51
Cul4aQ3TCH7 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cul4aQ3TCH7 Gm13461-201ENSMUST00000120980 662 ntBASIC11.88□□□□□ -0.51
Cul4aQ3TCH7 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cul4aQ3TCH7 Gm23085-201ENSMUST00000157849 293 ntBASIC11.88□□□□□ -0.51
Cul4aQ3TCH7 Gm24074-201ENSMUST00000158178 260 ntBASIC11.88□□□□□ -0.51
Cul4aQ3TCH7 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cul4aQ3TCH7 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.88□□□□□ -0.51
Cul4aQ3TCH7 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cul4aQ3TCH7 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC11.88□□□□□ -0.51
Cul4aQ3TCH7 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cul4aQ3TCH7 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cul4aQ3TCH7 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cul4aQ3TCH7 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Cul4aQ3TCH7 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cul4aQ3TCH7 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cul4aQ3TCH7 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cul4aQ3TCH7 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cul4aQ3TCH7 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cul4aQ3TCH7 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cul4aQ3TCH7 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cul4aQ3TCH7 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Cul4aQ3TCH7 Gm43972-201ENSMUST00000181398 1467 ntBASIC11.88□□□□□ -0.51
Cul4aQ3TCH7 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cul4aQ3TCH7 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cul4aQ3TCH7 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cul4aQ3TCH7 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cul4aQ3TCH7 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cul4aQ3TCH7 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cul4aQ3TCH7 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cul4aQ3TCH7 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cul4aQ3TCH7 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cul4aQ3TCH7 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 Gm8731-201ENSMUST00000118088 412 ntBASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 Gm11573-201ENSMUST00000119956 394 ntBASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 Gm9540-201ENSMUST00000188230 478 ntBASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 Gm37301-201ENSMUST00000195412 568 ntBASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 Gm4482-201ENSMUST00000200876 742 ntBASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 Gm17825-201ENSMUST00000206836 794 ntBASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 Gm45331-201ENSMUST00000209868 554 ntBASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 AC124732.3-201ENSMUST00000221835 1765 ntBASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cul4aQ3TCH7 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cul4aQ3TCH7 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Cul4aQ3TCH7 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cul4aQ3TCH7 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cul4aQ3TCH7 Gm45041-201ENSMUST00000207366 3108 ntBASIC11.86□□□□□ -0.51
Cul4aQ3TCH7 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cul4aQ3TCH7 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cul4aQ3TCH7 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.86□□□□□ -0.51
Cul4aQ3TCH7 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC11.86□□□□□ -0.51
Cul4aQ3TCH7 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms