Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm18889-201ENSMUST00000174284 929 ntBASIC9.27□□□□□ -0.93
Trim63Q38HM4 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC9.27□□□□□ -0.93
Trim63Q38HM4 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trim63Q38HM4 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC9.27□□□□□ -0.93
Trim63Q38HM4 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC9.27□□□□□ -0.93
Trim63Q38HM4 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trim63Q38HM4 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Trim63Q38HM4 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Trim63Q38HM4 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Trim63Q38HM4 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Trim63Q38HM4 Slc2a1-201ENSMUST00000030398 3260 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trim63Q38HM4 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Trim63Q38HM4 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trim63Q38HM4 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Trim63Q38HM4 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trim63Q38HM4 Nedd4-201ENSMUST00000034740 5499 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trim63Q38HM4 Adamtsl3-203ENSMUST00000173287 7249 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Trim63Q38HM4 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trim63Q38HM4 Spty2d1-201ENSMUST00000061639 5223 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trim63Q38HM4 L1cam-203ENSMUST00000114430 5126 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Trim63Q38HM4 Srprb-201ENSMUST00000035157 3064 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trim63Q38HM4 Dock9-206ENSMUST00000212181 7368 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trim63Q38HM4 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trim63Q38HM4 P2ry14-202ENSMUST00000091112 1795 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trim63Q38HM4 Olfr1512-202ENSMUST00000214980 2082 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Trim63Q38HM4 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trim63Q38HM4 Il12rb2-201ENSMUST00000018485 2998 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trim63Q38HM4 Snd1-206ENSMUST00000167201 3781 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Trim63Q38HM4 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Trim63Q38HM4 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trim63Q38HM4 Eef2k-204ENSMUST00000106489 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trim63Q38HM4 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trim63Q38HM4 Gm4784-201ENSMUST00000117365 1824 ntBASIC9.26□□□□□ -0.93
Trim63Q38HM4 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC9.26□□□□□ -0.93
Trim63Q38HM4 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Trim63Q38HM4 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Trim63Q38HM4 Gm30373-201ENSMUST00000215774 3500 ntTSL 5 BASIC9.26□□□□□ -0.93
Trim63Q38HM4 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trim63Q38HM4 Exoc7-203ENSMUST00000106413 3298 ntAPPRIS ALT1 TSL 5 BASIC9.26□□□□□ -0.93
Trim63Q38HM4 Nrp2-201ENSMUST00000027112 4216 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Trim63Q38HM4 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trim63Q38HM4 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trim63Q38HM4 Gm9083-201ENSMUST00000120423 819 ntBASIC9.26□□□□□ -0.93
Trim63Q38HM4 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC9.26□□□□□ -0.93
Trim63Q38HM4 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trim63Q38HM4 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
Trim63Q38HM4 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC9.26□□□□□ -0.93
Trim63Q38HM4 Gm43094-201ENSMUST00000196549 921 ntBASIC9.26□□□□□ -0.93
Trim63Q38HM4 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC9.26□□□□□ -0.93
Trim63Q38HM4 Lect2-202ENSMUST00000225183 823 ntBASIC9.26□□□□□ -0.93
Trim63Q38HM4 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trim63Q38HM4 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trim63Q38HM4 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trim63Q38HM4 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trim63Q38HM4 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trim63Q38HM4 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Trim63Q38HM4 Rreb1-201ENSMUST00000037232 8395 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Trim63Q38HM4 Pcdhga2-201ENSMUST00000193869 4689 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trim63Q38HM4 Cdh23-204ENSMUST00000105463 10991 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Trim63Q38HM4 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Trim63Q38HM4 Tubgcp6-202ENSMUST00000109353 7635 ntAPPRIS P2 TSL 5 BASIC9.26□□□□□ -0.93
Trim63Q38HM4 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Trim63Q38HM4 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trim63Q38HM4 Vps33a-201ENSMUST00000031388 4235 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trim63Q38HM4 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Trim63Q38HM4 Tcn2-202ENSMUST00000109988 1957 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Trim63Q38HM4 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Trim63Q38HM4 Gm10152-201ENSMUST00000193475 1344 ntBASIC9.26□□□□□ -0.93
Trim63Q38HM4 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Trim63Q38HM4 A630009H07Rik-201ENSMUST00000208485 2159 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Trim63Q38HM4 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC9.26□□□□□ -0.93
Trim63Q38HM4 N4bp2l1-205ENSMUST00000202031 1864 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trim63Q38HM4 Mrpl51-201ENSMUST00000032485 3427 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim63Q38HM4 Atg9a-201ENSMUST00000040689 3764 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim63Q38HM4 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim63Q38HM4 Gabrb3-206ENSMUST00000196198 4348 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trim63Q38HM4 Gm45124-201ENSMUST00000206723 2755 ntBASIC9.25□□□□□ -0.93
Trim63Q38HM4 Pknox1-201ENSMUST00000097352 4172 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim63Q38HM4 Gm15482-201ENSMUST00000152691 4529 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trim63Q38HM4 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trim63Q38HM4 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim63Q38HM4 Wdr78-201ENSMUST00000036451 3671 ntTSL 5 BASIC9.25□□□□□ -0.93
Trim63Q38HM4 Sepsecs-201ENSMUST00000031069 5252 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim63Q38HM4 9130019O22Rik-201ENSMUST00000049052 3878 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim63Q38HM4 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Trim63Q38HM4 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim63Q38HM4 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trim63Q38HM4 Ncapg2-201ENSMUST00000084828 4684 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Trim63Q38HM4 Fam53b-202ENSMUST00000097998 4341 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trim63Q38HM4 Add2-210ENSMUST00000205034 3266 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim63Q38HM4 Gm14612-201ENSMUST00000121522 881 ntBASIC9.25□□□□□ -0.93
Trim63Q38HM4 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trim63Q38HM4 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trim63Q38HM4 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Trim63Q38HM4 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trim63Q38HM4 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Trim63Q38HM4 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC9.25□□□□□ -0.93
Trim63Q38HM4 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC9.25□□□□□ -0.93
Trim63Q38HM4 CT009713.10-202ENSMUST00000225734 696 ntBASIC9.25□□□□□ -0.93
Trim63Q38HM4 AC155252.2-201ENSMUST00000226946 680 ntBASIC9.25□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms