Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm9544-201ENSMUST00000223349 2482 ntBASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Tcl1-201ENSMUST00000041316 1398 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Gm11960-201ENSMUST00000122068 925 ntBASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Gm12551-201ENSMUST00000122073 726 ntBASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Gm26609-201ENSMUST00000181302 852 ntTSL 5 BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 1810018F18Rik-201ENSMUST00000188253 277 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Gm9120-201ENSMUST00000190835 994 ntBASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Tdrkh-203ENSMUST00000196386 1050 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Gm43110-201ENSMUST00000198877 226 ntBASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Gm33080-201ENSMUST00000205429 172 ntBASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Sell-202ENSMUST00000097491 1215 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Actl9-201ENSMUST00000174088 1373 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Gm5939-201ENSMUST00000119613 2874 ntBASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Gm26910-201ENSMUST00000180450 698 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Gm28199-201ENSMUST00000187127 619 ntTSL 3 BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Gm4270-201ENSMUST00000209666 406 ntBASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Ctxn3-203ENSMUST00000209786 1283 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 AC098716.1-201ENSMUST00000213527 703 ntBASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Gm36495-201ENSMUST00000221201 684 ntTSL 5 BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 CT025535.1-202ENSMUST00000228291 241 ntBASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 1810018F18Rik-202ENSMUST00000189546 1447 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Ms4a3-201ENSMUST00000112984 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Ccl19-203ENSMUST00000140546 773 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Gm37871-201ENSMUST00000194973 688 ntBASIC5.76□□□□□ -1.49
Ush2AQ2QI47 AC161581.1-201ENSMUST00000228696 318 ntBASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Mir9-3hg-202ENSMUST00000181511 3412 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Rnase13-201ENSMUST00000089771 1412 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Gm19027-201ENSMUST00000187291 1355 ntBASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Slc35b3-201ENSMUST00000021870 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Ifna13-201ENSMUST00000105149 819 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Olfr1343-ps1-201ENSMUST00000117414 914 ntBASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Rpl7a-ps13-201ENSMUST00000121692 563 ntBASIC5.76□□□□□ -1.49
Ush2AQ2QI47 4930453O03Rik-201ENSMUST00000147594 1236 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Gm34727-201ENSMUST00000195175 529 ntBASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Gm42803-201ENSMUST00000201051 451 ntBASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Gm13178-201ENSMUST00000036876 1227 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Gm8882-201ENSMUST00000080849 1240 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Sh2d6-201ENSMUST00000089687 1162 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Olfr73-201ENSMUST00000099838 942 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Gm37036-201ENSMUST00000192836 2506 ntBASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Gm11405-201ENSMUST00000118689 1556 ntBASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Katnal2-211ENSMUST00000154665 1515 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Mir688-201ENSMUST00000102055 75 ntBASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Gm42464-202ENSMUST00000198111 774 ntBASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Tas2r141-ps4-201ENSMUST00000205072 946 ntBASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Gm35665-201ENSMUST00000206742 1140 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Gm18559-201ENSMUST00000208249 604 ntBASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Gm8689-201ENSMUST00000218709 712 ntBASIC5.76□□□□□ -1.49
Ush2AQ2QI47 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 200.4 ms