Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn6Q03958 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.42□□□□□ -0.58
Pfdn6Q03958 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.42□□□□□ -0.58
Pfdn6Q03958 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Pfdn6Q03958 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn6Q03958 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pfdn6Q03958 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn6Q03958 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn6Q03958 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn6Q03958 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn6Q03958 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Pfdn6Q03958 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Pfdn6Q03958 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn6Q03958 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.41□□□□□ -0.58
Pfdn6Q03958 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn6Q03958 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Pfdn6Q03958 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn6Q03958 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn6Q03958 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.41□□□□□ -0.58
Pfdn6Q03958 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.41□□□□□ -0.58
Pfdn6Q03958 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Pfdn6Q03958 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn6Q03958 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn6Q03958 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn6Q03958 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn6Q03958 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn6Q03958 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Pfdn6Q03958 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn6Q03958 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Pfdn6Q03958 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.41□□□□□ -0.58
Pfdn6Q03958 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn6Q03958 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn6Q03958 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn6Q03958 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
Pfdn6Q03958 Gm11941-201ENSMUST00000119904 610 ntBASIC11.41□□□□□ -0.58
Pfdn6Q03958 Gm8199-201ENSMUST00000121323 823 ntBASIC11.41□□□□□ -0.58
Pfdn6Q03958 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn6Q03958 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Pfdn6Q03958 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.41□□□□□ -0.58
Pfdn6Q03958 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn6Q03958 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Pfdn6Q03958 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn6Q03958 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.41□□□□□ -0.58
Pfdn6Q03958 AC160929.1-201ENSMUST00000221247 415 ntBASIC11.41□□□□□ -0.58
Pfdn6Q03958 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
Pfdn6Q03958 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn6Q03958 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn6Q03958 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.41□□□□□ -0.58
Pfdn6Q03958 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Pfdn6Q03958 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.41□□□□□ -0.58
Pfdn6Q03958 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn6Q03958 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn6Q03958 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.41□□□□□ -0.58
Pfdn6Q03958 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn6Q03958 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn6Q03958 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn6Q03958 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.41□□□□□ -0.58
Pfdn6Q03958 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn6Q03958 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Pfdn6Q03958 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Pfdn6Q03958 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.41□□□□□ -0.58
Pfdn6Q03958 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.41□□□□□ -0.58
Pfdn6Q03958 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn6Q03958 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn6Q03958 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pfdn6Q03958 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Pfdn6Q03958 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Pfdn6Q03958 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn6Q03958 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn6Q03958 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn6Q03958 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.4□□□□□ -0.58
Pfdn6Q03958 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn6Q03958 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn6Q03958 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Pfdn6Q03958 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Pfdn6Q03958 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.4□□□□□ -0.58
Pfdn6Q03958 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Pfdn6Q03958 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn6Q03958 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn6Q03958 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn6Q03958 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Pfdn6Q03958 Gm14058-201ENSMUST00000116082 735 ntBASIC11.4□□□□□ -0.58
Pfdn6Q03958 Gm15566-201ENSMUST00000121130 590 ntBASIC11.4□□□□□ -0.58
Pfdn6Q03958 Gm11450-201ENSMUST00000121144 333 ntBASIC11.4□□□□□ -0.58
Pfdn6Q03958 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.4□□□□□ -0.58
Pfdn6Q03958 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.4□□□□□ -0.58
Pfdn6Q03958 Gm22846-201ENSMUST00000157706 270 ntBASIC11.4□□□□□ -0.58
Pfdn6Q03958 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn6Q03958 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.4□□□□□ -0.58
Pfdn6Q03958 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.4□□□□□ -0.58
Pfdn6Q03958 Gm8342-201ENSMUST00000209839 757 ntBASIC11.4□□□□□ -0.58
Pfdn6Q03958 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.4□□□□□ -0.58
Pfdn6Q03958 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.4□□□□□ -0.58
Pfdn6Q03958 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.4□□□□□ -0.58
Pfdn6Q03958 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn6Q03958 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn6Q03958 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Pfdn6Q03958 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn6Q03958 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn6Q03958 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms