Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx3-2P97503 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx3-2P97503 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Nkx3-2P97503 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx3-2P97503 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx3-2P97503 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx3-2P97503 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
Nkx3-2P97503 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx3-2P97503 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx3-2P97503 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx3-2P97503 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx3-2P97503 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx3-2P97503 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx3-2P97503 AC169511.2-201ENSMUST00000226674 2063 ntBASIC10.78□□□□□ -0.68
Nkx3-2P97503 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx3-2P97503 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx3-2P97503 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx3-2P97503 Gm43963-201ENSMUST00000203466 2488 ntBASIC10.78□□□□□ -0.68
Nkx3-2P97503 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx3-2P97503 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx3-2P97503 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx3-2P97503 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx3-2P97503 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx3-2P97503 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx3-2P97503 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx3-2P97503 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Nkx3-2P97503 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Nkx3-2P97503 Gm10829-201ENSMUST00000202084 2988 ntBASIC10.77□□□□□ -0.68
Nkx3-2P97503 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Nkx3-2P97503 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC10.77□□□□□ -0.68
Nkx3-2P97503 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Nkx3-2P97503 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.68
Nkx3-2P97503 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Nkx3-2P97503 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Nkx3-2P97503 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx3-2P97503 Gm17230-201ENSMUST00000171194 3942 ntBASIC10.77□□□□□ -0.69
Nkx3-2P97503 Gm15615-201ENSMUST00000118876 198 ntBASIC10.77□□□□□ -0.69
Nkx3-2P97503 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC10.77□□□□□ -0.69
Nkx3-2P97503 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC10.77□□□□□ -0.69
Nkx3-2P97503 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx3-2P97503 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC10.77□□□□□ -0.69
Nkx3-2P97503 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC10.77□□□□□ -0.69
Nkx3-2P97503 Gm42518-201ENSMUST00000196277 938 ntBASIC10.77□□□□□ -0.69
Nkx3-2P97503 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx3-2P97503 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx3-2P97503 Gm8342-201ENSMUST00000209839 757 ntBASIC10.77□□□□□ -0.69
Nkx3-2P97503 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC10.77□□□□□ -0.69
Nkx3-2P97503 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC10.77□□□□□ -0.69
Nkx3-2P97503 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Nkx3-2P97503 CT009546.1-201ENSMUST00000222573 1120 ntBASIC10.77□□□□□ -0.69
Nkx3-2P97503 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx3-2P97503 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx3-2P97503 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx3-2P97503 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx3-2P97503 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx3-2P97503 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx3-2P97503 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx3-2P97503 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx3-2P97503 Gm13384-201ENSMUST00000117166 1344 ntBASIC10.77□□□□□ -0.69
Nkx3-2P97503 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx3-2P97503 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx3-2P97503 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.77□□□□□ -0.69
Nkx3-2P97503 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx3-2P97503 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx3-2P97503 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Nkx3-2P97503 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC10.77□□□□□ -0.69
Nkx3-2P97503 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx3-2P97503 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
Nkx3-2P97503 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx3-2P97503 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Nkx3-2P97503 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.76□□□□□ -0.69
Nkx3-2P97503 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Nkx3-2P97503 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx3-2P97503 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Nkx3-2P97503 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx3-2P97503 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx3-2P97503 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.76□□□□□ -0.69
Nkx3-2P97503 AC154314.2-201ENSMUST00000223677 3502 ntBASIC10.76□□□□□ -0.69
Nkx3-2P97503 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Nkx3-2P97503 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx3-2P97503 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC10.76□□□□□ -0.69
Nkx3-2P97503 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx3-2P97503 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx3-2P97503 Gm25076-201ENSMUST00000104098 132 ntBASIC10.76□□□□□ -0.69
Nkx3-2P97503 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx3-2P97503 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Nkx3-2P97503 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Nkx3-2P97503 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx3-2P97503 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
Nkx3-2P97503 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC10.76□□□□□ -0.69
Nkx3-2P97503 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx3-2P97503 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx3-2P97503 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Nkx3-2P97503 Gm10731-201ENSMUST00000181171 448 ntBASIC10.76□□□□□ -0.69
Nkx3-2P97503 Gm8574-201ENSMUST00000203207 924 ntBASIC10.76□□□□□ -0.69
Nkx3-2P97503 Gm18065-201ENSMUST00000221395 526 ntBASIC10.76□□□□□ -0.69
Nkx3-2P97503 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx3-2P97503 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx3-2P97503 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Nkx3-2P97503 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms