Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC10.52□□□□□ -0.73
Cacna1aP97445 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC10.52□□□□□ -0.73
Cacna1aP97445 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Cacna1aP97445 CT030170.2-201ENSMUST00000223267 126 ntBASIC10.52□□□□□ -0.73
Cacna1aP97445 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Cacna1aP97445 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.52□□□□□ -0.73
Cacna1aP97445 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cacna1aP97445 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
Cacna1aP97445 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Cacna1aP97445 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cacna1aP97445 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cacna1aP97445 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cacna1aP97445 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cacna1aP97445 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cacna1aP97445 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cacna1aP97445 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Cacna1aP97445 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cacna1aP97445 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cacna1aP97445 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Cacna1aP97445 Gm12418-201ENSMUST00000118116 942 ntBASIC10.51□□□□□ -0.73
Cacna1aP97445 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cacna1aP97445 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC10.51□□□□□ -0.73
Cacna1aP97445 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.51□□□□□ -0.73
Cacna1aP97445 Gm18256-201ENSMUST00000209087 907 ntBASIC10.51□□□□□ -0.73
Cacna1aP97445 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC10.51□□□□□ -0.73
Cacna1aP97445 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC10.51□□□□□ -0.73
Cacna1aP97445 Capsl-202ENSMUST00000226688 739 ntBASIC10.51□□□□□ -0.73
Cacna1aP97445 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cacna1aP97445 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cacna1aP97445 Rps18-201ENSMUST00000008812 600 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cacna1aP97445 Gm5507-201ENSMUST00000091897 1008 ntBASIC10.51□□□□□ -0.73
Cacna1aP97445 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cacna1aP97445 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cacna1aP97445 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cacna1aP97445 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
Cacna1aP97445 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cacna1aP97445 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cacna1aP97445 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cacna1aP97445 Gm15626-201ENSMUST00000117478 868 ntBASIC10.51□□□□□ -0.73
Cacna1aP97445 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC10.51□□□□□ -0.73
Cacna1aP97445 Gm12668-201ENSMUST00000134966 575 ntTSL 3 BASIC10.51□□□□□ -0.73
Cacna1aP97445 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Cacna1aP97445 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Cacna1aP97445 Gm9369-201ENSMUST00000196009 733 ntBASIC10.51□□□□□ -0.73
Cacna1aP97445 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cacna1aP97445 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cacna1aP97445 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cacna1aP97445 Gm20554-201ENSMUST00000177421 2352 ntBASIC10.5□□□□□ -0.73
Cacna1aP97445 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cacna1aP97445 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cacna1aP97445 St3gal6-207ENSMUST00000137035 4123 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cacna1aP97445 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cacna1aP97445 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cacna1aP97445 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cacna1aP97445 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cacna1aP97445 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cacna1aP97445 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cacna1aP97445 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cacna1aP97445 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Cacna1aP97445 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Cacna1aP97445 Gm14497-201ENSMUST00000119537 580 ntBASIC10.5□□□□□ -0.73
Cacna1aP97445 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cacna1aP97445 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC10.5□□□□□ -0.73
Cacna1aP97445 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC10.5□□□□□ -0.73
Cacna1aP97445 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cacna1aP97445 Gm44605-201ENSMUST00000206892 949 ntBASIC10.5□□□□□ -0.73
Cacna1aP97445 Gm9102-201ENSMUST00000219250 465 ntBASIC10.5□□□□□ -0.73
Cacna1aP97445 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cacna1aP97445 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cacna1aP97445 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cacna1aP97445 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC10.5□□□□□ -0.73
Cacna1aP97445 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cacna1aP97445 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cacna1aP97445 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cacna1aP97445 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.5□□□□□ -0.73
Cacna1aP97445 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cacna1aP97445 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cacna1aP97445 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC10.5□□□□□ -0.73
Cacna1aP97445 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cacna1aP97445 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cacna1aP97445 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Cacna1aP97445 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cacna1aP97445 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Cacna1aP97445 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cacna1aP97445 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cacna1aP97445 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Cacna1aP97445 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
Cacna1aP97445 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC10.5□□□□□ -0.73
Cacna1aP97445 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC10.5□□□□□ -0.73
Cacna1aP97445 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cacna1aP97445 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cacna1aP97445 Gm16283-201ENSMUST00000149935 522 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cacna1aP97445 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cacna1aP97445 Gm22763-201ENSMUST00000158374 107 ntBASIC10.5□□□□□ -0.73
Cacna1aP97445 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
Cacna1aP97445 Gm9162-201ENSMUST00000182081 991 ntBASIC10.5□□□□□ -0.73
Cacna1aP97445 Zc2hc1a-203ENSMUST00000193010 1420 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cacna1aP97445 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Cacna1aP97445 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
Cacna1aP97445 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms