Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43cP86449 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43cP86449 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43cP86449 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43cP86449 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC12.34□□□□□ -0.43
Trim43cP86449 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trim43cP86449 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43cP86449 Gm37368-201ENSMUST00000193173 3212 ntBASIC12.34□□□□□ -0.43
Trim43cP86449 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43cP86449 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Trim43cP86449 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43cP86449 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43cP86449 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43cP86449 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43cP86449 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim43cP86449 Gm44663-201ENSMUST00000206898 3150 ntBASIC12.34□□□□□ -0.43
Trim43cP86449 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43cP86449 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43cP86449 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43cP86449 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43cP86449 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trim43cP86449 Gm11331-201ENSMUST00000119764 288 ntBASIC12.34□□□□□ -0.43
Trim43cP86449 Gm13408-201ENSMUST00000119822 798 ntBASIC12.34□□□□□ -0.43
Trim43cP86449 Gm13935-201ENSMUST00000121859 798 ntBASIC12.34□□□□□ -0.43
Trim43cP86449 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC12.34□□□□□ -0.43
Trim43cP86449 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trim43cP86449 Gm23694-201ENSMUST00000179335 110 ntBASIC12.34□□□□□ -0.43
Trim43cP86449 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12.34□□□□□ -0.43
Trim43cP86449 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43cP86449 Gm37905-201ENSMUST00000195310 341 ntBASIC12.34□□□□□ -0.43
Trim43cP86449 Gm43852-201ENSMUST00000202098 917 ntBASIC12.34□□□□□ -0.43
Trim43cP86449 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Trim43cP86449 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim43cP86449 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43cP86449 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43cP86449 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43cP86449 Gm23105-201ENSMUST00000083719 134 ntBASIC12.34□□□□□ -0.43
Trim43cP86449 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43cP86449 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43cP86449 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43cP86449 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43cP86449 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43cP86449 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43cP86449 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43cP86449 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trim43cP86449 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43cP86449 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43cP86449 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Trim43cP86449 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim43cP86449 Gm43972-201ENSMUST00000181398 1467 ntBASIC12.34□□□□□ -0.43
Trim43cP86449 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trim43cP86449 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43cP86449 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43cP86449 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43cP86449 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim43cP86449 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43cP86449 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trim43cP86449 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trim43cP86449 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trim43cP86449 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43cP86449 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43cP86449 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43cP86449 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43cP86449 Gm16219-201ENSMUST00000120096 274 ntBASIC12.33□□□□□ -0.44
Trim43cP86449 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC12.33□□□□□ -0.44
Trim43cP86449 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43cP86449 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43cP86449 Gm22846-201ENSMUST00000157706 270 ntBASIC12.33□□□□□ -0.44
Trim43cP86449 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Trim43cP86449 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC12.33□□□□□ -0.44
Trim43cP86449 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC12.33□□□□□ -0.44
Trim43cP86449 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43cP86449 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43cP86449 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43cP86449 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43cP86449 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43cP86449 Gm29245-201ENSMUST00000187332 1416 ntBASIC12.33□□□□□ -0.44
Trim43cP86449 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43cP86449 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trim43cP86449 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43cP86449 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43cP86449 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43cP86449 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43cP86449 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43cP86449 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43cP86449 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43cP86449 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.33□□□□□ -0.44
Trim43cP86449 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Trim43cP86449 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trim43cP86449 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trim43cP86449 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43cP86449 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43cP86449 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim43cP86449 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43cP86449 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43cP86449 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43cP86449 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43cP86449 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43cP86449 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim43cP86449 Gm17213-201ENSMUST00000165161 1360 ntBASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms