Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CiitaP79621 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CiitaP79621 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CiitaP79621 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC12.29□□□□□ -0.44
CiitaP79621 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CiitaP79621 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CiitaP79621 Gm43152-201ENSMUST00000202495 1638 ntBASIC12.29□□□□□ -0.44
CiitaP79621 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CiitaP79621 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CiitaP79621 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CiitaP79621 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CiitaP79621 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CiitaP79621 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CiitaP79621 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CiitaP79621 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CiitaP79621 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CiitaP79621 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CiitaP79621 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CiitaP79621 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CiitaP79621 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CiitaP79621 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC12.28□□□□□ -0.44
CiitaP79621 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CiitaP79621 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC12.28□□□□□ -0.44
CiitaP79621 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CiitaP79621 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CiitaP79621 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CiitaP79621 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
CiitaP79621 Snord17-201ENSMUST00000104526 238 ntBASIC12.28□□□□□ -0.44
CiitaP79621 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC12.28□□□□□ -0.44
CiitaP79621 Gm14398-201ENSMUST00000117287 1073 ntBASIC12.28□□□□□ -0.44
CiitaP79621 Gm9133-201ENSMUST00000118289 540 ntBASIC12.28□□□□□ -0.44
CiitaP79621 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CiitaP79621 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC12.28□□□□□ -0.44
CiitaP79621 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC12.28□□□□□ -0.44
CiitaP79621 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CiitaP79621 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CiitaP79621 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
CiitaP79621 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CiitaP79621 AC164618.2-201ENSMUST00000224770 573 ntBASIC12.28□□□□□ -0.44
CiitaP79621 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
CiitaP79621 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CiitaP79621 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CiitaP79621 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CiitaP79621 n-R5s211-201ENSMUST00000093689 119 ntBASIC12.28□□□□□ -0.44
CiitaP79621 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CiitaP79621 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CiitaP79621 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CiitaP79621 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CiitaP79621 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CiitaP79621 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CiitaP79621 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CiitaP79621 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CiitaP79621 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CiitaP79621 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CiitaP79621 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CiitaP79621 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CiitaP79621 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CiitaP79621 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CiitaP79621 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CiitaP79621 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.28□□□□□ -0.44
CiitaP79621 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CiitaP79621 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
CiitaP79621 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
CiitaP79621 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CiitaP79621 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CiitaP79621 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CiitaP79621 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
CiitaP79621 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
CiitaP79621 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CiitaP79621 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CiitaP79621 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.27□□□□□ -0.44
CiitaP79621 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
CiitaP79621 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CiitaP79621 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CiitaP79621 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CiitaP79621 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CiitaP79621 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
CiitaP79621 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
CiitaP79621 Gm9673-201ENSMUST00000119287 781 ntBASIC12.27□□□□□ -0.45
CiitaP79621 Gm15197-201ENSMUST00000120526 478 ntBASIC12.27□□□□□ -0.45
CiitaP79621 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC12.27□□□□□ -0.45
CiitaP79621 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC12.27□□□□□ -0.45
CiitaP79621 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.27□□□□□ -0.45
CiitaP79621 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC12.27□□□□□ -0.45
CiitaP79621 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC12.27□□□□□ -0.45
CiitaP79621 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC12.27□□□□□ -0.45
CiitaP79621 Gm9369-201ENSMUST00000196009 733 ntBASIC12.27□□□□□ -0.45
CiitaP79621 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CiitaP79621 Id2-203ENSMUST00000222667 958 ntBASIC12.27□□□□□ -0.45
CiitaP79621 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
CiitaP79621 Gm16380-201ENSMUST00000077997 478 ntBASIC12.27□□□□□ -0.45
CiitaP79621 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CiitaP79621 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CiitaP79621 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CiitaP79621 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CiitaP79621 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.27□□□□□ -0.45
CiitaP79621 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.27□□□□□ -0.45
CiitaP79621 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CiitaP79621 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CiitaP79621 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms