Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cux2P70298 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC18.22■□□□□ 0.51
Cux2P70298 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cux2P70298 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC18.22■□□□□ 0.51
Cux2P70298 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cux2P70298 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cux2P70298 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Cux2P70298 AC116596.1-201ENSMUST00000228112 1762 ntBASIC18.22■□□□□ 0.51
Cux2P70298 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC18.22■□□□□ 0.51
Cux2P70298 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cux2P70298 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cux2P70298 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cux2P70298 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cux2P70298 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cux2P70298 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cux2P70298 Gm14152-201ENSMUST00000127020 1073 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cux2P70298 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cux2P70298 1810058I24Rik-201ENSMUST00000130875 690 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cux2P70298 H2afy3-201ENSMUST00000151919 1112 ntBASIC18.22■□□□□ 0.51
Cux2P70298 Rps18-206ENSMUST00000174609 527 ntTSL 2 BASIC18.22■□□□□ 0.51
Cux2P70298 Fam47e-205ENSMUST00000175974 1016 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cux2P70298 Gm26532-201ENSMUST00000180630 690 ntBASIC18.22■□□□□ 0.51
Cux2P70298 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC18.22■□□□□ 0.51
Cux2P70298 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Cux2P70298 Speer2-201ENSMUST00000076500 1118 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Cux2P70298 Gm38194-201ENSMUST00000194529 2211 ntBASIC18.22■□□□□ 0.51
Cux2P70298 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cux2P70298 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cux2P70298 Fcrl1-206ENSMUST00000194786 1540 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cux2P70298 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cux2P70298 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Cux2P70298 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cux2P70298 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cux2P70298 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cux2P70298 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cux2P70298 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cux2P70298 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Cux2P70298 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cux2P70298 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cux2P70298 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC18.21■□□□□ 0.51
Cux2P70298 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cux2P70298 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cux2P70298 Gm15599-201ENSMUST00000122283 1345 ntBASIC18.21■□□□□ 0.51
Cux2P70298 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cux2P70298 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cux2P70298 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cux2P70298 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cux2P70298 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cux2P70298 Sh3bgrl3-202ENSMUST00000105879 518 ntTSL 3 BASIC18.21■□□□□ 0.51
Cux2P70298 Gm14227-201ENSMUST00000119431 629 ntBASIC18.21■□□□□ 0.51
Cux2P70298 Gm14616-201ENSMUST00000131690 314 ntTSL 3 BASIC18.21■□□□□ 0.51
Cux2P70298 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC18.21■□□□□ 0.51
Cux2P70298 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC18.21■□□□□ 0.51
Cux2P70298 Gm23479-201ENSMUST00000158876 122 ntBASIC18.21■□□□□ 0.51
Cux2P70298 Gm22662-201ENSMUST00000175290 256 ntBASIC18.21■□□□□ 0.51
Cux2P70298 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
Cux2P70298 Zfp787-203ENSMUST00000207331 376 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cux2P70298 Prss23os-203ENSMUST00000208814 975 ntTSL 5 BASIC18.21■□□□□ 0.51
Cux2P70298 Prss23os-204ENSMUST00000209064 972 ntTSL 5 BASIC18.21■□□□□ 0.51
Cux2P70298 AC165092.1-201ENSMUST00000224018 486 ntBASIC18.21■□□□□ 0.51
Cux2P70298 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cux2P70298 Olfr47-201ENSMUST00000078057 1059 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Cux2P70298 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cux2P70298 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Cux2P70298 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cux2P70298 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cux2P70298 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cux2P70298 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cux2P70298 Gm13456-201ENSMUST00000118928 1365 ntBASIC18.2■□□□□ 0.5
Cux2P70298 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cux2P70298 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Cux2P70298 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cux2P70298 Gm22751-201ENSMUST00000102077 109 ntBASIC18.2■□□□□ 0.5
Cux2P70298 Mir692-3-201ENSMUST00000102079 109 ntBASIC18.2■□□□□ 0.5
Cux2P70298 Mir692-2-201ENSMUST00000102081 109 ntBASIC18.2■□□□□ 0.5
Cux2P70298 Gm13547-202ENSMUST00000113810 629 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cux2P70298 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cux2P70298 Gm13393-201ENSMUST00000141935 396 ntTSL 5 BASIC18.2■□□□□ 0.5
Cux2P70298 Vmn2r-ps125-201ENSMUST00000176234 931 ntBASIC18.2■□□□□ 0.5
Cux2P70298 Gm4866-201ENSMUST00000197408 589 ntBASIC18.2■□□□□ 0.5
Cux2P70298 Gm31378-201ENSMUST00000213538 267 ntTSL 5 BASIC18.2■□□□□ 0.5
Cux2P70298 Gm36172-201ENSMUST00000219852 723 ntTSL 3 BASIC18.2■□□□□ 0.5
Cux2P70298 CT025679.1-201ENSMUST00000227106 449 ntBASIC18.2■□□□□ 0.5
Cux2P70298 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cux2P70298 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cux2P70298 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cux2P70298 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cux2P70298 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cux2P70298 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Cux2P70298 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cux2P70298 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cux2P70298 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cux2P70298 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cux2P70298 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cux2P70298 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cux2P70298 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cux2P70298 Ifna5-201ENSMUST00000102804 570 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Cux2P70298 Gm24066-201ENSMUST00000104515 131 ntBASIC18.19■□□□□ 0.5
Cux2P70298 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cux2P70298 Gm12950-201ENSMUST00000121683 417 ntBASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms