Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Crnkl1P63154 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Crnkl1P63154 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC11.23□□□□□ -0.61
Crnkl1P63154 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Crnkl1P63154 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Crnkl1P63154 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Crnkl1P63154 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Crnkl1P63154 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Crnkl1P63154 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Crnkl1P63154 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Crnkl1P63154 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Crnkl1P63154 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Crnkl1P63154 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Crnkl1P63154 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Crnkl1P63154 Gm11960-201ENSMUST00000122068 925 ntBASIC11.22□□□□□ -0.61
Crnkl1P63154 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Crnkl1P63154 Gm15547-201ENSMUST00000122152 333 ntBASIC11.22□□□□□ -0.61
Crnkl1P63154 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Crnkl1P63154 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Crnkl1P63154 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Crnkl1P63154 Gm13570-201ENSMUST00000140763 309 ntBASIC11.22□□□□□ -0.61
Crnkl1P63154 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.22□□□□□ -0.61
Crnkl1P63154 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Crnkl1P63154 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Crnkl1P63154 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Crnkl1P63154 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Crnkl1P63154 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.22□□□□□ -0.61
Crnkl1P63154 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Crnkl1P63154 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Crnkl1P63154 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Crnkl1P63154 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.22□□□□□ -0.61
Crnkl1P63154 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Crnkl1P63154 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.22□□□□□ -0.61
Crnkl1P63154 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC11.22□□□□□ -0.61
Crnkl1P63154 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC11.22□□□□□ -0.61
Crnkl1P63154 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Crnkl1P63154 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Crnkl1P63154 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Crnkl1P63154 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Crnkl1P63154 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Crnkl1P63154 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Crnkl1P63154 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.22□□□□□ -0.61
Crnkl1P63154 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Crnkl1P63154 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Crnkl1P63154 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Crnkl1P63154 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Crnkl1P63154 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Crnkl1P63154 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Crnkl1P63154 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Crnkl1P63154 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Crnkl1P63154 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Crnkl1P63154 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Crnkl1P63154 Gm37031-201ENSMUST00000195487 2530 ntBASIC11.22□□□□□ -0.61
Crnkl1P63154 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Crnkl1P63154 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Crnkl1P63154 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Crnkl1P63154 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC11.21□□□□□ -0.61
Crnkl1P63154 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Crnkl1P63154 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Crnkl1P63154 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Crnkl1P63154 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.21□□□□□ -0.61
Crnkl1P63154 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Crnkl1P63154 Gm25214-201ENSMUST00000104573 129 ntBASIC11.21□□□□□ -0.61
Crnkl1P63154 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Crnkl1P63154 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.21□□□□□ -0.61
Crnkl1P63154 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.21□□□□□ -0.61
Crnkl1P63154 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.21□□□□□ -0.61
Crnkl1P63154 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.21□□□□□ -0.61
Crnkl1P63154 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Crnkl1P63154 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Crnkl1P63154 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Crnkl1P63154 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC11.21□□□□□ -0.62
Crnkl1P63154 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.62
Crnkl1P63154 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC11.21□□□□□ -0.62
Crnkl1P63154 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.21□□□□□ -0.62
Crnkl1P63154 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Crnkl1P63154 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Crnkl1P63154 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Crnkl1P63154 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Crnkl1P63154 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Crnkl1P63154 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Crnkl1P63154 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Crnkl1P63154 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Crnkl1P63154 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Crnkl1P63154 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Crnkl1P63154 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Crnkl1P63154 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.2□□□□□ -0.62
Crnkl1P63154 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Crnkl1P63154 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Crnkl1P63154 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Crnkl1P63154 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
Crnkl1P63154 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Crnkl1P63154 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Crnkl1P63154 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Crnkl1P63154 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Crnkl1P63154 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Crnkl1P63154 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Crnkl1P63154 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Crnkl1P63154 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Crnkl1P63154 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms