Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
ThraP63058 Gm14441-201ENSMUST00000121960 540 ntBASIC11.52□□□□□ -0.57
ThraP63058 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
ThraP63058 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC11.52□□□□□ -0.57
ThraP63058 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC11.52□□□□□ -0.57
ThraP63058 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC11.52□□□□□ -0.57
ThraP63058 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
ThraP63058 AC140293.1-201ENSMUST00000225626 1247 ntBASIC11.52□□□□□ -0.57
ThraP63058 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ThraP63058 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
ThraP63058 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
ThraP63058 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
ThraP63058 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ThraP63058 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ThraP63058 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ThraP63058 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
ThraP63058 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
ThraP63058 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
ThraP63058 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.52□□□□□ -0.57
ThraP63058 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
ThraP63058 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
ThraP63058 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
ThraP63058 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ThraP63058 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ThraP63058 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
ThraP63058 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
ThraP63058 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ThraP63058 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
ThraP63058 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.51□□□□□ -0.57
ThraP63058 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.51□□□□□ -0.57
ThraP63058 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ThraP63058 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
ThraP63058 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
ThraP63058 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ThraP63058 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
ThraP63058 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ThraP63058 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ThraP63058 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ThraP63058 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ThraP63058 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
ThraP63058 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
ThraP63058 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ThraP63058 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ThraP63058 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
ThraP63058 Gm11700-201ENSMUST00000119409 403 ntBASIC11.51□□□□□ -0.57
ThraP63058 Gm11956-201ENSMUST00000119525 512 ntBASIC11.51□□□□□ -0.57
ThraP63058 Gm15566-201ENSMUST00000121130 590 ntBASIC11.51□□□□□ -0.57
ThraP63058 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.51□□□□□ -0.57
ThraP63058 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ThraP63058 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
ThraP63058 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.51□□□□□ -0.57
ThraP63058 Gm19287-201ENSMUST00000203190 358 ntBASIC11.51□□□□□ -0.57
ThraP63058 Gm10752-201ENSMUST00000218348 729 ntBASIC11.51□□□□□ -0.57
ThraP63058 AC153505.1-201ENSMUST00000218819 1071 ntBASIC11.51□□□□□ -0.57
ThraP63058 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC11.51□□□□□ -0.57
ThraP63058 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
ThraP63058 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ThraP63058 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
ThraP63058 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ThraP63058 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ThraP63058 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ThraP63058 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ThraP63058 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ThraP63058 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ThraP63058 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
ThraP63058 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ThraP63058 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ThraP63058 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.51□□□□□ -0.57
ThraP63058 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
ThraP63058 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
ThraP63058 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.5□□□□□ -0.57
ThraP63058 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
ThraP63058 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ThraP63058 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.5□□□□□ -0.57
ThraP63058 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
ThraP63058 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ThraP63058 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
ThraP63058 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
ThraP63058 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
ThraP63058 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ThraP63058 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
ThraP63058 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
ThraP63058 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
ThraP63058 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
ThraP63058 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
ThraP63058 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
ThraP63058 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
ThraP63058 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
ThraP63058 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
ThraP63058 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
ThraP63058 Gm14585-201ENSMUST00000120713 634 ntBASIC11.5□□□□□ -0.57
ThraP63058 Gm11246-201ENSMUST00000120880 345 ntBASIC11.5□□□□□ -0.57
ThraP63058 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC11.5□□□□□ -0.57
ThraP63058 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
ThraP63058 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
ThraP63058 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC11.5□□□□□ -0.57
ThraP63058 Gm5714-201ENSMUST00000197343 566 ntBASIC11.5□□□□□ -0.57
ThraP63058 Gm17931-201ENSMUST00000208132 634 ntBASIC11.5□□□□□ -0.57
ThraP63058 Gm7600-201ENSMUST00000209657 785 ntBASIC11.5□□□□□ -0.57
ThraP63058 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms