Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39P62892 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39P62892 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39P62892 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39P62892 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39P62892 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39P62892 Gm15163-201ENSMUST00000120749 1302 ntBASIC8.03□□□□□ -1.12
Rpl39P62892 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39P62892 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39P62892 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC8.03□□□□□ -1.12
Rpl39P62892 Gm44826-201ENSMUST00000207648 2332 ntBASIC8.03□□□□□ -1.12
Rpl39P62892 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Rpl39P62892 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Rpl39P62892 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39P62892 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39P62892 Pdpk1-202ENSMUST00000102927 7161 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39P62892 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39P62892 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39P62892 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC8.03□□□□□ -1.12
Rpl39P62892 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39P62892 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39P62892 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39P62892 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39P62892 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39P62892 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39P62892 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39P62892 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39P62892 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39P62892 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39P62892 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39P62892 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC8.03□□□□□ -1.12
Rpl39P62892 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39P62892 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39P62892 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC8.03□□□□□ -1.12
Rpl39P62892 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39P62892 Mir8093-201ENSMUST00000185043 137 ntBASIC8.03□□□□□ -1.12
Rpl39P62892 Gm43133-201ENSMUST00000197472 463 ntBASIC8.03□□□□□ -1.12
Rpl39P62892 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC8.03□□□□□ -1.12
Rpl39P62892 Gm6450-201ENSMUST00000200896 574 ntBASIC8.03□□□□□ -1.12
Rpl39P62892 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39P62892 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39P62892 AC160929.1-201ENSMUST00000221247 415 ntBASIC8.03□□□□□ -1.12
Rpl39P62892 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC8.03□□□□□ -1.12
Rpl39P62892 AC134869.4-202ENSMUST00000224350 837 ntBASIC8.03□□□□□ -1.12
Rpl39P62892 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Rpl39P62892 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39P62892 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39P62892 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Rpl39P62892 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Rpl39P62892 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Rpl39P62892 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Rpl39P62892 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39P62892 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39P62892 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39P62892 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39P62892 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39P62892 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39P62892 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rpl39P62892 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC8.03□□□□□ -1.12
Rpl39P62892 Gm6203-201ENSMUST00000209575 1342 ntBASIC8.03□□□□□ -1.12
Rpl39P62892 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
Rpl39P62892 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Rpl39P62892 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
Rpl39P62892 AC149588.2-201ENSMUST00000228182 1859 ntBASIC8.02□□□□□ -1.12
Rpl39P62892 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Rpl39P62892 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
Rpl39P62892 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl39P62892 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl39P62892 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl39P62892 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl39P62892 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl39P62892 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl39P62892 AC109214.1-201ENSMUST00000219520 1372 ntBASIC8.02□□□□□ -1.13
Rpl39P62892 Phtf1os-201ENSMUST00000160110 4046 ntBASIC8.02□□□□□ -1.13
Rpl39P62892 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl39P62892 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Rpl39P62892 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl39P62892 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Rpl39P62892 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl39P62892 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl39P62892 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl39P62892 Gm12015-201ENSMUST00000117065 843 ntBASIC8.02□□□□□ -1.13
Rpl39P62892 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC8.02□□□□□ -1.13
Rpl39P62892 Gm14660-201ENSMUST00000119809 575 ntBASIC8.02□□□□□ -1.13
Rpl39P62892 Gm12129-201ENSMUST00000120104 1147 ntBASIC8.02□□□□□ -1.13
Rpl39P62892 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC8.02□□□□□ -1.13
Rpl39P62892 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl39P62892 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl39P62892 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC8.02□□□□□ -1.13
Rpl39P62892 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Rpl39P62892 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl39P62892 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Rpl39P62892 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC8.02□□□□□ -1.13
Rpl39P62892 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC8.02□□□□□ -1.13
Rpl39P62892 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC8.02□□□□□ -1.13
Rpl39P62892 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC8.02□□□□□ -1.13
Rpl39P62892 Gm18539-201ENSMUST00000204745 1090 ntBASIC8.02□□□□□ -1.13
Rpl39P62892 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Rpl39P62892 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC8.02□□□□□ -1.13
Rpl39P62892 AC140406.1-201ENSMUST00000226481 465 ntBASIC8.02□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms