Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm1P58771 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Tpm1P58771 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm1P58771 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.62□□□□□ -0.39
Tpm1P58771 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.62□□□□□ -0.39
Tpm1P58771 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.62□□□□□ -0.39
Tpm1P58771 Gm31256-201ENSMUST00000194705 506 ntBASIC12.62□□□□□ -0.39
Tpm1P58771 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC12.62□□□□□ -0.39
Tpm1P58771 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm1P58771 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm1P58771 Gzmn-202ENSMUST00000225535 989 ntBASIC12.62□□□□□ -0.39
Tpm1P58771 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm1P58771 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Tpm1P58771 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Tpm1P58771 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Tpm1P58771 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm1P58771 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm1P58771 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm1P58771 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm1P58771 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm1P58771 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm1P58771 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm1P58771 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Tpm1P58771 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tpm1P58771 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tpm1P58771 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tpm1P58771 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tpm1P58771 Gm44663-201ENSMUST00000206898 3150 ntBASIC12.61□□□□□ -0.39
Tpm1P58771 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tpm1P58771 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tpm1P58771 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tpm1P58771 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tpm1P58771 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tpm1P58771 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Tpm1P58771 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Tpm1P58771 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tpm1P58771 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tpm1P58771 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Tpm1P58771 Gm26286-201ENSMUST00000104166 134 ntBASIC12.61□□□□□ -0.39
Tpm1P58771 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Tpm1P58771 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Tpm1P58771 Gm11930-201ENSMUST00000117788 190 ntBASIC12.61□□□□□ -0.39
Tpm1P58771 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.61□□□□□ -0.39
Tpm1P58771 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.61□□□□□ -0.39
Tpm1P58771 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tpm1P58771 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tpm1P58771 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tpm1P58771 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Tpm1P58771 Gm27046-201ENSMUST00000182160 463 ntBASIC12.61□□□□□ -0.39
Tpm1P58771 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Tpm1P58771 Gm19309-201ENSMUST00000218295 205 ntBASIC12.61□□□□□ -0.39
Tpm1P58771 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.61□□□□□ -0.39
Tpm1P58771 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tpm1P58771 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.61□□□□□ -0.39
Tpm1P58771 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.61□□□□□ -0.39
Tpm1P58771 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tpm1P58771 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tpm1P58771 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tpm1P58771 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.61□□□□□ -0.39
Tpm1P58771 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tpm1P58771 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Tpm1P58771 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tpm1P58771 Gm43999-201ENSMUST00000204286 2889 ntBASIC12.61□□□□□ -0.39
Tpm1P58771 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Tpm1P58771 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Tpm1P58771 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tpm1P58771 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC12.61□□□□□ -0.39
Tpm1P58771 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.61□□□□□ -0.39
Tpm1P58771 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tpm1P58771 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Tpm1P58771 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tpm1P58771 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC12.61□□□□□ -0.39
Tpm1P58771 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tpm1P58771 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tpm1P58771 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tpm1P58771 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.6□□□□□ -0.39
Tpm1P58771 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tpm1P58771 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tpm1P58771 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tpm1P58771 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.6□□□□□ -0.39
Tpm1P58771 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tpm1P58771 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tpm1P58771 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tpm1P58771 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tpm1P58771 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tpm1P58771 Gm23931-201ENSMUST00000103842 109 ntBASIC12.6□□□□□ -0.39
Tpm1P58771 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tpm1P58771 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Tpm1P58771 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Tpm1P58771 Gm13829-201ENSMUST00000119600 138 ntBASIC12.6□□□□□ -0.39
Tpm1P58771 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.6□□□□□ -0.39
Tpm1P58771 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Tpm1P58771 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
Tpm1P58771 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.6□□□□□ -0.39
Tpm1P58771 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.6□□□□□ -0.39
Tpm1P58771 Mir8093-201ENSMUST00000185043 137 ntBASIC12.6□□□□□ -0.39
Tpm1P58771 Gm43692-201ENSMUST00000198236 1062 ntBASIC12.6□□□□□ -0.39
Tpm1P58771 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Tpm1P58771 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tpm1P58771 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms