Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rrp1P56183 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rrp1P56183 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.78□□□□□ -0.36
Rrp1P56183 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Rrp1P56183 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rrp1P56183 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rrp1P56183 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Rrp1P56183 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC12.78□□□□□ -0.36
Rrp1P56183 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Rrp1P56183 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC12.78□□□□□ -0.36
Rrp1P56183 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rrp1P56183 Gm37031-201ENSMUST00000195487 2530 ntBASIC12.78□□□□□ -0.36
Rrp1P56183 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rrp1P56183 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rrp1P56183 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Rrp1P56183 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rrp1P56183 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rrp1P56183 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rrp1P56183 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rrp1P56183 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rrp1P56183 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Rrp1P56183 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Rrp1P56183 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rrp1P56183 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rrp1P56183 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rrp1P56183 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rrp1P56183 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rrp1P56183 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rrp1P56183 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Rrp1P56183 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rrp1P56183 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rrp1P56183 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
Rrp1P56183 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.77□□□□□ -0.37
Rrp1P56183 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.77□□□□□ -0.37
Rrp1P56183 Gm26361-201ENSMUST00000158868 186 ntBASIC12.77□□□□□ -0.37
Rrp1P56183 Olfml3-204ENSMUST00000169286 874 ntBASIC12.77□□□□□ -0.37
Rrp1P56183 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC12.77□□□□□ -0.37
Rrp1P56183 Gm16505-201ENSMUST00000179981 232 ntBASIC12.77□□□□□ -0.37
Rrp1P56183 Gm29199-201ENSMUST00000187766 775 ntBASIC12.77□□□□□ -0.37
Rrp1P56183 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.77□□□□□ -0.37
Rrp1P56183 Gm42867-201ENSMUST00000202995 469 ntBASIC12.77□□□□□ -0.37
Rrp1P56183 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.77□□□□□ -0.37
Rrp1P56183 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.77□□□□□ -0.37
Rrp1P56183 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.77□□□□□ -0.37
Rrp1P56183 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rrp1P56183 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Rrp1P56183 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.77□□□□□ -0.37
Rrp1P56183 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rrp1P56183 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC12.77□□□□□ -0.37
Rrp1P56183 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rrp1P56183 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rrp1P56183 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Rrp1P56183 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rrp1P56183 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rrp1P56183 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rrp1P56183 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rrp1P56183 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rrp1P56183 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rrp1P56183 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rrp1P56183 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rrp1P56183 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rrp1P56183 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rrp1P56183 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rrp1P56183 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rrp1P56183 Gm15236-201ENSMUST00000117309 379 ntBASIC12.76□□□□□ -0.37
Rrp1P56183 Gm14130-201ENSMUST00000118417 987 ntBASIC12.76□□□□□ -0.37
Rrp1P56183 Gm12380-201ENSMUST00000119012 544 ntBASIC12.76□□□□□ -0.37
Rrp1P56183 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Rrp1P56183 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rrp1P56183 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
Rrp1P56183 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rrp1P56183 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.76□□□□□ -0.37
Rrp1P56183 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC12.76□□□□□ -0.37
Rrp1P56183 Gm45575-201ENSMUST00000210283 548 ntBASIC12.76□□□□□ -0.37
Rrp1P56183 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.76□□□□□ -0.37
Rrp1P56183 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rrp1P56183 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rrp1P56183 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC12.76□□□□□ -0.37
Rrp1P56183 AC154171.2-201ENSMUST00000225219 2652 ntBASIC12.76□□□□□ -0.37
Rrp1P56183 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC12.76□□□□□ -0.37
Rrp1P56183 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rrp1P56183 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rrp1P56183 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rrp1P56183 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rrp1P56183 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC12.76□□□□□ -0.37
Rrp1P56183 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rrp1P56183 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rrp1P56183 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.76□□□□□ -0.37
Rrp1P56183 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rrp1P56183 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rrp1P56183 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Rrp1P56183 AC122291.1-201ENSMUST00000228937 5748 ntBASIC12.75□□□□□ -0.37
Rrp1P56183 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rrp1P56183 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rrp1P56183 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Rrp1P56183 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Rrp1P56183 Gm23949-201ENSMUST00000104027 127 ntBASIC12.75□□□□□ -0.37
Rrp1P56183 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Rrp1P56183 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rrp1P56183 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms