Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Abcd3P55096 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC10.16□□□□□ -0.78
Abcd3P55096 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC10.16□□□□□ -0.78
Abcd3P55096 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Abcd3P55096 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Abcd3P55096 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Abcd3P55096 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Abcd3P55096 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Abcd3P55096 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Abcd3P55096 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Abcd3P55096 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Abcd3P55096 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Abcd3P55096 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Abcd3P55096 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Abcd3P55096 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC10.16□□□□□ -0.78
Abcd3P55096 Gm45206-201ENSMUST00000206885 2285 ntBASIC10.16□□□□□ -0.78
Abcd3P55096 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Abcd3P55096 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Abcd3P55096 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Abcd3P55096 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Abcd3P55096 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Abcd3P55096 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Abcd3P55096 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC10.15□□□□□ -0.78
Abcd3P55096 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
Abcd3P55096 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Abcd3P55096 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Abcd3P55096 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Abcd3P55096 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Abcd3P55096 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Abcd3P55096 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
Abcd3P55096 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Abcd3P55096 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Abcd3P55096 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Abcd3P55096 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC10.15□□□□□ -0.78
Abcd3P55096 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Abcd3P55096 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Abcd3P55096 Gm22711-201ENSMUST00000116890 133 ntBASIC10.15□□□□□ -0.78
Abcd3P55096 Gm15374-201ENSMUST00000119313 844 ntBASIC10.15□□□□□ -0.78
Abcd3P55096 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC10.15□□□□□ -0.78
Abcd3P55096 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC10.15□□□□□ -0.78
Abcd3P55096 Gm6397-201ENSMUST00000161973 1069 ntBASIC10.15□□□□□ -0.78
Abcd3P55096 Gm25732-201ENSMUST00000175168 60 ntBASIC10.15□□□□□ -0.78
Abcd3P55096 Gm7741-201ENSMUST00000181445 989 ntBASIC10.15□□□□□ -0.78
Abcd3P55096 Gm37246-201ENSMUST00000192665 835 ntBASIC10.15□□□□□ -0.78
Abcd3P55096 Gm37835-201ENSMUST00000193305 361 ntBASIC10.15□□□□□ -0.78
Abcd3P55096 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC10.15□□□□□ -0.78
Abcd3P55096 Gm42867-201ENSMUST00000202995 469 ntBASIC10.15□□□□□ -0.78
Abcd3P55096 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Abcd3P55096 Abhd11os-203ENSMUST00000222613 363 ntBASIC10.15□□□□□ -0.78
Abcd3P55096 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Abcd3P55096 Gm7551-201ENSMUST00000089593 1074 ntBASIC10.15□□□□□ -0.78
Abcd3P55096 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Abcd3P55096 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Abcd3P55096 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Abcd3P55096 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Abcd3P55096 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Abcd3P55096 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Abcd3P55096 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Abcd3P55096 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Abcd3P55096 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Abcd3P55096 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Abcd3P55096 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Abcd3P55096 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Abcd3P55096 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Abcd3P55096 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Abcd3P55096 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Abcd3P55096 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Abcd3P55096 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Abcd3P55096 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Abcd3P55096 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
Abcd3P55096 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC10.15□□□□□ -0.79
Abcd3P55096 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.79
Abcd3P55096 Gm6831-202ENSMUST00000213025 1673 ntBASIC10.15□□□□□ -0.79
Abcd3P55096 Gm29245-201ENSMUST00000187332 1416 ntBASIC10.15□□□□□ -0.79
Abcd3P55096 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Abcd3P55096 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Abcd3P55096 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Abcd3P55096 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Abcd3P55096 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Abcd3P55096 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Abcd3P55096 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC10.14□□□□□ -0.79
Abcd3P55096 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Abcd3P55096 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Abcd3P55096 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC10.14□□□□□ -0.79
Abcd3P55096 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Abcd3P55096 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Abcd3P55096 Gm18198-201ENSMUST00000204986 1551 ntBASIC10.14□□□□□ -0.79
Abcd3P55096 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Abcd3P55096 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Abcd3P55096 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Abcd3P55096 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Abcd3P55096 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Abcd3P55096 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC10.14□□□□□ -0.79
Abcd3P55096 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Abcd3P55096 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.14□□□□□ -0.79
Abcd3P55096 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC10.14□□□□□ -0.79
Abcd3P55096 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Abcd3P55096 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Abcd3P55096 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Abcd3P55096 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms