Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Msh6P54276 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Msh6P54276 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Msh6P54276 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Msh6P54276 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Msh6P54276 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Msh6P54276 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Msh6P54276 Gm13204-201ENSMUST00000120110 821 ntBASIC14.31□□□□□ -0.12
Msh6P54276 Gm3828-201ENSMUST00000121817 257 ntBASIC14.31□□□□□ -0.12
Msh6P54276 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC14.31□□□□□ -0.12
Msh6P54276 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC14.31□□□□□ -0.12
Msh6P54276 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Msh6P54276 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC14.31□□□□□ -0.12
Msh6P54276 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Msh6P54276 AC122024.3-201ENSMUST00000217719 294 ntBASIC14.31□□□□□ -0.12
Msh6P54276 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Msh6P54276 CT030135.2-201ENSMUST00000225255 893 ntBASIC14.31□□□□□ -0.12
Msh6P54276 CT010480.2-201ENSMUST00000225424 737 ntBASIC14.31□□□□□ -0.12
Msh6P54276 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Msh6P54276 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Msh6P54276 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Msh6P54276 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Msh6P54276 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Msh6P54276 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Msh6P54276 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Msh6P54276 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC14.31□□□□□ -0.12
Msh6P54276 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Msh6P54276 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Msh6P54276 Gm2238-201ENSMUST00000192074 3669 ntBASIC14.31□□□□□ -0.12
Msh6P54276 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Msh6P54276 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Msh6P54276 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Msh6P54276 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Msh6P54276 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Msh6P54276 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC14.3□□□□□ -0.12
Msh6P54276 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Msh6P54276 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Msh6P54276 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Msh6P54276 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Msh6P54276 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Msh6P54276 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Msh6P54276 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.3□□□□□ -0.12
Msh6P54276 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Msh6P54276 Gm38344-201ENSMUST00000195306 1353 ntBASIC14.3□□□□□ -0.12
Msh6P54276 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC14.3□□□□□ -0.12
Msh6P54276 Gm12129-201ENSMUST00000120104 1147 ntBASIC14.3□□□□□ -0.12
Msh6P54276 Gm9166-201ENSMUST00000120293 561 ntBASIC14.3□□□□□ -0.12
Msh6P54276 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Msh6P54276 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Msh6P54276 Mir432-201ENSMUST00000157230 75 ntBASIC14.3□□□□□ -0.12
Msh6P54276 Gm23675-201ENSMUST00000157311 125 ntBASIC14.3□□□□□ -0.12
Msh6P54276 Gm17221-201ENSMUST00000163909 481 ntBASIC14.3□□□□□ -0.12
Msh6P54276 Gm17073-201ENSMUST00000168069 556 ntBASIC14.3□□□□□ -0.12
Msh6P54276 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Msh6P54276 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Msh6P54276 Gm43547-201ENSMUST00000197729 328 ntBASIC14.3□□□□□ -0.12
Msh6P54276 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Msh6P54276 Gm7939-201ENSMUST00000201233 1050 ntBASIC14.3□□□□□ -0.12
Msh6P54276 BC080696-201ENSMUST00000202858 1218 ntBASIC14.3□□□□□ -0.12
Msh6P54276 Gm6331-201ENSMUST00000217890 450 ntBASIC14.3□□□□□ -0.12
Msh6P54276 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC14.3□□□□□ -0.12
Msh6P54276 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC14.3□□□□□ -0.12
Msh6P54276 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Msh6P54276 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Msh6P54276 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC14.3□□□□□ -0.12
Msh6P54276 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Msh6P54276 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Msh6P54276 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Msh6P54276 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Msh6P54276 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Msh6P54276 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Msh6P54276 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Msh6P54276 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Msh6P54276 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Msh6P54276 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Msh6P54276 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Msh6P54276 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Msh6P54276 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msh6P54276 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msh6P54276 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Msh6P54276 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Msh6P54276 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msh6P54276 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msh6P54276 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msh6P54276 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msh6P54276 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC14.29□□□□□ -0.12
Msh6P54276 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Msh6P54276 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msh6P54276 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msh6P54276 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC14.29□□□□□ -0.12
Msh6P54276 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msh6P54276 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msh6P54276 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Msh6P54276 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Msh6P54276 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC14.29□□□□□ -0.12
Msh6P54276 Gng5-ps-201ENSMUST00000120931 205 ntBASIC14.29□□□□□ -0.12
Msh6P54276 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC14.29□□□□□ -0.12
Msh6P54276 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC14.29□□□□□ -0.12
Msh6P54276 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Msh6P54276 Gm25569-201ENSMUST00000157175 131 ntBASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms