Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Sox3P53784 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC10.93□□□□□ -0.66
Sox3P53784 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Sox3P53784 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Sox3P53784 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.93□□□□□ -0.66
Sox3P53784 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sox3P53784 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC10.93□□□□□ -0.66
Sox3P53784 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sox3P53784 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox3P53784 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
Sox3P53784 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox3P53784 Gm6903-201ENSMUST00000160509 1366 ntBASIC10.92□□□□□ -0.66
Sox3P53784 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox3P53784 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox3P53784 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox3P53784 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sox3P53784 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox3P53784 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox3P53784 Gm12036-201ENSMUST00000120008 530 ntBASIC10.92□□□□□ -0.66
Sox3P53784 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC10.92□□□□□ -0.66
Sox3P53784 Gm22146-201ENSMUST00000157397 288 ntBASIC10.92□□□□□ -0.66
Sox3P53784 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Sox3P53784 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sox3P53784 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sox3P53784 Gm9135-201ENSMUST00000182963 990 ntBASIC10.92□□□□□ -0.66
Sox3P53784 Mir6407-201ENSMUST00000184510 101 ntBASIC10.92□□□□□ -0.66
Sox3P53784 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.92□□□□□ -0.66
Sox3P53784 Gm38114-201ENSMUST00000191877 1232 ntBASIC10.92□□□□□ -0.66
Sox3P53784 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC10.92□□□□□ -0.66
Sox3P53784 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sox3P53784 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC10.92□□□□□ -0.66
Sox3P53784 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC10.92□□□□□ -0.66
Sox3P53784 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC10.92□□□□□ -0.66
Sox3P53784 AC166344.1-201ENSMUST00000223745 674 ntBASIC10.92□□□□□ -0.66
Sox3P53784 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox3P53784 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Sox3P53784 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Sox3P53784 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sox3P53784 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox3P53784 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox3P53784 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox3P53784 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox3P53784 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox3P53784 AC122291.1-201ENSMUST00000228937 5748 ntBASIC10.92□□□□□ -0.66
Sox3P53784 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox3P53784 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Sox3P53784 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox3P53784 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox3P53784 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.92□□□□□ -0.66
Sox3P53784 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox3P53784 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC10.92□□□□□ -0.66
Sox3P53784 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox3P53784 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox3P53784 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Sox3P53784 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox3P53784 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Sox3P53784 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Sox3P53784 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox3P53784 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox3P53784 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sox3P53784 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Sox3P53784 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox3P53784 Gm38140-201ENSMUST00000193617 2755 ntBASIC10.91□□□□□ -0.66
Sox3P53784 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox3P53784 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sox3P53784 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox3P53784 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox3P53784 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox3P53784 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox3P53784 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sox3P53784 Gm24791-201ENSMUST00000104284 131 ntBASIC10.91□□□□□ -0.66
Sox3P53784 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sox3P53784 Gm12579-201ENSMUST00000118040 783 ntBASIC10.91□□□□□ -0.66
Sox3P53784 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.91□□□□□ -0.66
Sox3P53784 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sox3P53784 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sox3P53784 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC10.91□□□□□ -0.66
Sox3P53784 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC10.91□□□□□ -0.66
Sox3P53784 Gm26134-201ENSMUST00000178484 110 ntBASIC10.91□□□□□ -0.66
Sox3P53784 Gm5340-201ENSMUST00000203733 880 ntBASIC10.91□□□□□ -0.66
Sox3P53784 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Sox3P53784 Gm45410-201ENSMUST00000211331 1093 ntBASIC10.91□□□□□ -0.66
Sox3P53784 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Sox3P53784 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.91□□□□□ -0.66
Sox3P53784 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox3P53784 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox3P53784 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox3P53784 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC10.91□□□□□ -0.66
Sox3P53784 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Sox3P53784 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Sox3P53784 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox3P53784 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox3P53784 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Sox3P53784 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.91□□□□□ -0.66
Sox3P53784 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox3P53784 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC10.9□□□□□ -0.66
Sox3P53784 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox3P53784 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox3P53784 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Sox3P53784 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms