Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Cux1P53564 Gm8873-201ENSMUST00000217847 1439 ntBASIC17.18■□□□□ 0.34
Cux1P53564 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cux1P53564 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cux1P53564 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cux1P53564 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cux1P53564 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Cux1P53564 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Cux1P53564 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cux1P53564 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Cux1P53564 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cux1P53564 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
Cux1P53564 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Cux1P53564 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cux1P53564 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC17.18■□□□□ 0.34
Cux1P53564 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cux1P53564 CT025679.1-201ENSMUST00000227106 449 ntBASIC17.18■□□□□ 0.34
Cux1P53564 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Cux1P53564 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Cux1P53564 Gm7964-201ENSMUST00000051522 1378 ntBASIC17.18■□□□□ 0.34
Cux1P53564 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC17.18■□□□□ 0.34
Cux1P53564 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cux1P53564 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cux1P53564 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cux1P53564 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Cux1P53564 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cux1P53564 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cux1P53564 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cux1P53564 Gm23604-201ENSMUST00000104311 132 ntBASIC17.17■□□□□ 0.34
Cux1P53564 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cux1P53564 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cux1P53564 Gm6291-201ENSMUST00000179994 309 ntBASIC17.17■□□□□ 0.34
Cux1P53564 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC17.17■□□□□ 0.34
Cux1P53564 Gm45745-201ENSMUST00000211447 1180 ntBASIC17.17■□□□□ 0.34
Cux1P53564 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cux1P53564 Gm18042-201ENSMUST00000219887 790 ntBASIC17.17■□□□□ 0.34
Cux1P53564 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cux1P53564 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cux1P53564 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Cux1P53564 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Cux1P53564 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cux1P53564 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC17.17■□□□□ 0.34
Cux1P53564 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cux1P53564 Gm7405-201ENSMUST00000121476 1337 ntBASIC17.17■□□□□ 0.34
Cux1P53564 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cux1P53564 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Cux1P53564 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cux1P53564 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cux1P53564 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Cux1P53564 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cux1P53564 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Cux1P53564 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cux1P53564 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cux1P53564 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
Cux1P53564 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cux1P53564 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cux1P53564 Gm22495-201ENSMUST00000104492 126 ntBASIC17.16■□□□□ 0.34
Cux1P53564 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cux1P53564 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC17.16■□□□□ 0.34
Cux1P53564 Gm9644-201ENSMUST00000212828 1183 ntBASIC17.16■□□□□ 0.34
Cux1P53564 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cux1P53564 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Cux1P53564 Gm25514-201ENSMUST00000083860 135 ntBASIC17.16■□□□□ 0.34
Cux1P53564 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cux1P53564 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cux1P53564 AC153524.2-202ENSMUST00000220401 1794 ntBASIC17.16■□□□□ 0.34
Cux1P53564 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Cux1P53564 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cux1P53564 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cux1P53564 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cux1P53564 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cux1P53564 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cux1P53564 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cux1P53564 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cux1P53564 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cux1P53564 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC17.16■□□□□ 0.34
Cux1P53564 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cux1P53564 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cux1P53564 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Cux1P53564 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cux1P53564 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cux1P53564 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC17.16■□□□□ 0.34
Cux1P53564 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cux1P53564 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
Cux1P53564 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cux1P53564 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC17.16■□□□□ 0.34
Cux1P53564 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cux1P53564 Gm37688-201ENSMUST00000195195 465 ntBASIC17.16■□□□□ 0.34
Cux1P53564 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC17.16■□□□□ 0.34
Cux1P53564 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cux1P53564 AC154585.1-201ENSMUST00000218917 997 ntBASIC17.16■□□□□ 0.34
Cux1P53564 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC17.16■□□□□ 0.34
Cux1P53564 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Cux1P53564 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cux1P53564 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cux1P53564 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cux1P53564 Gm42971-201ENSMUST00000199228 2079 ntBASIC17.15■□□□□ 0.34
Cux1P53564 Gm43727-201ENSMUST00000198021 2647 ntBASIC17.15■□□□□ 0.34
Cux1P53564 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cux1P53564 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms