Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gli1P47806 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.09□□□□□ -0.63
Gli1P47806 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gli1P47806 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gli1P47806 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.09□□□□□ -0.63
Gli1P47806 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gli1P47806 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gli1P47806 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Gli1P47806 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Gli1P47806 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Gli1P47806 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Gli1P47806 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.09□□□□□ -0.63
Gli1P47806 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Gli1P47806 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Gli1P47806 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Gli1P47806 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Gli1P47806 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gli1P47806 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gli1P47806 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Gli1P47806 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.09□□□□□ -0.63
Gli1P47806 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gli1P47806 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gli1P47806 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gli1P47806 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Gli1P47806 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gli1P47806 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gli1P47806 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gli1P47806 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Gli1P47806 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gli1P47806 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Gli1P47806 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gli1P47806 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Gli1P47806 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Gli1P47806 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.08□□□□□ -0.64
Gli1P47806 AC125409.1-201ENSMUST00000223213 3370 ntBASIC11.08□□□□□ -0.64
Gli1P47806 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gli1P47806 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Gli1P47806 Gm12501-201ENSMUST00000119163 529 ntBASIC11.08□□□□□ -0.64
Gli1P47806 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.08□□□□□ -0.64
Gli1P47806 Gm16397-201ENSMUST00000122201 494 ntBASIC11.08□□□□□ -0.64
Gli1P47806 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gli1P47806 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.08□□□□□ -0.64
Gli1P47806 Gm8194-201ENSMUST00000159783 859 ntBASIC11.08□□□□□ -0.64
Gli1P47806 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gli1P47806 Gm37246-201ENSMUST00000192665 835 ntBASIC11.08□□□□□ -0.64
Gli1P47806 Gm19287-201ENSMUST00000203190 358 ntBASIC11.08□□□□□ -0.64
Gli1P47806 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC11.08□□□□□ -0.64
Gli1P47806 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Gli1P47806 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.08□□□□□ -0.64
Gli1P47806 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Gli1P47806 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Gli1P47806 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC11.08□□□□□ -0.64
Gli1P47806 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gli1P47806 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gli1P47806 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gli1P47806 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gli1P47806 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Gli1P47806 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Gli1P47806 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gli1P47806 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gli1P47806 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.08□□□□□ -0.64
Gli1P47806 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gli1P47806 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gli1P47806 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Gli1P47806 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Gli1P47806 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gli1P47806 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Gli1P47806 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gli1P47806 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Gli1P47806 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gli1P47806 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Gli1P47806 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Gli1P47806 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Gli1P47806 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Gli1P47806 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.08□□□□□ -0.64
Gli1P47806 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gli1P47806 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Gli1P47806 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Gli1P47806 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Gli1P47806 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Gli1P47806 Btrc-209ENSMUST00000224478 2194 ntBASIC11.07□□□□□ -0.64
Gli1P47806 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.07□□□□□ -0.64
Gli1P47806 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gli1P47806 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gli1P47806 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gli1P47806 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gli1P47806 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.07□□□□□ -0.64
Gli1P47806 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Gli1P47806 Gm23251-201ENSMUST00000103773 110 ntBASIC11.07□□□□□ -0.64
Gli1P47806 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.07□□□□□ -0.64
Gli1P47806 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.07□□□□□ -0.64
Gli1P47806 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.07□□□□□ -0.64
Gli1P47806 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Gli1P47806 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
Gli1P47806 Gm18038-201ENSMUST00000197900 485 ntBASIC11.07□□□□□ -0.64
Gli1P47806 Gm4607-201ENSMUST00000206649 577 ntBASIC11.07□□□□□ -0.64
Gli1P47806 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.07□□□□□ -0.64
Gli1P47806 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Gli1P47806 Gm21811-201ENSMUST00000096485 930 ntBASIC11.07□□□□□ -0.64
Gli1P47806 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms