Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm43969-201ENSMUST00000204833 535 ntBASIC11.19□□□□□ -0.62
Sox18P43680 Tas2r141-ps4-201ENSMUST00000205072 946 ntBASIC11.19□□□□□ -0.62
Sox18P43680 Gm44681-201ENSMUST00000208447 842 ntBASIC11.19□□□□□ -0.62
Sox18P43680 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sox18P43680 Gm17910-201ENSMUST00000211038 838 ntBASIC11.19□□□□□ -0.62
Sox18P43680 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC11.19□□□□□ -0.62
Sox18P43680 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC11.19□□□□□ -0.62
Sox18P43680 Gm18329-201ENSMUST00000215832 589 ntBASIC11.19□□□□□ -0.62
Sox18P43680 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC11.19□□□□□ -0.62
Sox18P43680 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC11.19□□□□□ -0.62
Sox18P43680 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
Sox18P43680 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox18P43680 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox18P43680 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox18P43680 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox18P43680 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox18P43680 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox18P43680 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox18P43680 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox18P43680 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox18P43680 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox18P43680 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Sox18P43680 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox18P43680 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sox18P43680 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox18P43680 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox18P43680 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox18P43680 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox18P43680 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.19□□□□□ -0.62
Sox18P43680 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox18P43680 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Sox18P43680 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox18P43680 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Sox18P43680 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sox18P43680 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox18P43680 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Sox18P43680 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox18P43680 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Sox18P43680 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sox18P43680 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sox18P43680 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox18P43680 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sox18P43680 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Sox18P43680 Gm11858-201ENSMUST00000117935 838 ntBASIC11.18□□□□□ -0.62
Sox18P43680 Gm15615-201ENSMUST00000118876 198 ntBASIC11.18□□□□□ -0.62
Sox18P43680 Gm15403-201ENSMUST00000119343 1227 ntBASIC11.18□□□□□ -0.62
Sox18P43680 Gm14034-201ENSMUST00000120147 551 ntBASIC11.18□□□□□ -0.62
Sox18P43680 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.18□□□□□ -0.62
Sox18P43680 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox18P43680 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC11.18□□□□□ -0.62
Sox18P43680 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sox18P43680 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox18P43680 Gm25677-201ENSMUST00000174983 72 ntBASIC11.18□□□□□ -0.62
Sox18P43680 Gm43854-201ENSMUST00000200418 394 ntBASIC11.18□□□□□ -0.62
Sox18P43680 Gm8574-201ENSMUST00000203207 924 ntBASIC11.18□□□□□ -0.62
Sox18P43680 Gm5599-201ENSMUST00000209602 788 ntBASIC11.18□□□□□ -0.62
Sox18P43680 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC11.18□□□□□ -0.62
Sox18P43680 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC11.18□□□□□ -0.62
Sox18P43680 AC158392.1-201ENSMUST00000223720 1069 ntBASIC11.18□□□□□ -0.62
Sox18P43680 AC164597.2-201ENSMUST00000226738 603 ntBASIC11.18□□□□□ -0.62
Sox18P43680 AC121567.1-201ENSMUST00000227213 842 ntBASIC11.18□□□□□ -0.62
Sox18P43680 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox18P43680 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox18P43680 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox18P43680 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Sox18P43680 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox18P43680 Olfr23-202ENSMUST00000214210 2527 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Sox18P43680 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox18P43680 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox18P43680 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox18P43680 Gm18210-201ENSMUST00000209001 1524 ntBASIC11.18□□□□□ -0.62
Sox18P43680 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox18P43680 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sox18P43680 Gm42975-201ENSMUST00000200612 1491 ntBASIC11.18□□□□□ -0.62
Sox18P43680 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox18P43680 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sox18P43680 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox18P43680 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox18P43680 Arl14ep-202ENSMUST00000093883 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox18P43680 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Sox18P43680 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.17□□□□□ -0.62
Sox18P43680 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox18P43680 Gm4900-201ENSMUST00000222046 1628 ntBASIC11.17□□□□□ -0.62
Sox18P43680 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox18P43680 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox18P43680 Gm43341-201ENSMUST00000200104 1308 ntBASIC11.17□□□□□ -0.62
Sox18P43680 Il12a-201ENSMUST00000029345 1303 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Sox18P43680 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox18P43680 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox18P43680 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Sox18P43680 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox18P43680 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox18P43680 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox18P43680 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox18P43680 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Sox18P43680 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Sox18P43680 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Sox18P43680 Gm11834-201ENSMUST00000122257 585 ntBASIC11.17□□□□□ -0.62
Sox18P43680 Gm15620-201ENSMUST00000122949 270 ntBASIC11.17□□□□□ -0.62
Sox18P43680 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms