Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Msh2P43247 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Msh2P43247 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.69□□□□□ -0.54
Msh2P43247 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Msh2P43247 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Msh2P43247 Mir6927-201ENSMUST00000184494 71 ntBASIC11.69□□□□□ -0.54
Msh2P43247 Gm43966-201ENSMUST00000203301 612 ntBASIC11.69□□□□□ -0.54
Msh2P43247 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.69□□□□□ -0.54
Msh2P43247 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Msh2P43247 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Msh2P43247 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Msh2P43247 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Msh2P43247 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.69□□□□□ -0.54
Msh2P43247 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Msh2P43247 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Msh2P43247 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Msh2P43247 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Msh2P43247 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Msh2P43247 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Msh2P43247 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Msh2P43247 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Msh2P43247 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Msh2P43247 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Msh2P43247 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Msh2P43247 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Msh2P43247 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Msh2P43247 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.69□□□□□ -0.54
Msh2P43247 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.69□□□□□ -0.54
Msh2P43247 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Msh2P43247 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.69□□□□□ -0.54
Msh2P43247 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Msh2P43247 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Msh2P43247 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Msh2P43247 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Msh2P43247 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Msh2P43247 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Msh2P43247 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC11.68□□□□□ -0.54
Msh2P43247 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Msh2P43247 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Msh2P43247 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Msh2P43247 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Msh2P43247 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Msh2P43247 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Msh2P43247 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Msh2P43247 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Msh2P43247 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Msh2P43247 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Msh2P43247 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.68□□□□□ -0.54
Msh2P43247 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.68□□□□□ -0.54
Msh2P43247 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Msh2P43247 Gm28686-201ENSMUST00000187404 609 ntBASIC11.68□□□□□ -0.54
Msh2P43247 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Msh2P43247 Gm37466-201ENSMUST00000195692 652 ntBASIC11.68□□□□□ -0.54
Msh2P43247 Rps4l-202ENSMUST00000204242 789 ntBASIC11.68□□□□□ -0.54
Msh2P43247 Gm19208-201ENSMUST00000213861 912 ntBASIC11.68□□□□□ -0.54
Msh2P43247 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Msh2P43247 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.68□□□□□ -0.54
Msh2P43247 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.68□□□□□ -0.54
Msh2P43247 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.68□□□□□ -0.54
Msh2P43247 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Msh2P43247 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.68□□□□□ -0.54
Msh2P43247 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Msh2P43247 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Msh2P43247 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Msh2P43247 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Msh2P43247 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Msh2P43247 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Msh2P43247 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Msh2P43247 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Msh2P43247 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Msh2P43247 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Msh2P43247 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Msh2P43247 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Msh2P43247 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Msh2P43247 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
Msh2P43247 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Msh2P43247 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Msh2P43247 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Msh2P43247 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Msh2P43247 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Msh2P43247 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.67□□□□□ -0.54
Msh2P43247 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Msh2P43247 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Msh2P43247 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Msh2P43247 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Msh2P43247 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Msh2P43247 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Msh2P43247 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Msh2P43247 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Msh2P43247 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Msh2P43247 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Msh2P43247 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.67□□□□□ -0.54
Msh2P43247 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Msh2P43247 Gm12857-201ENSMUST00000117678 592 ntBASIC11.67□□□□□ -0.54
Msh2P43247 Gm12463-201ENSMUST00000118271 849 ntBASIC11.67□□□□□ -0.54
Msh2P43247 Gm4909-201ENSMUST00000118749 794 ntBASIC11.67□□□□□ -0.54
Msh2P43247 Gm12196-201ENSMUST00000120954 262 ntBASIC11.67□□□□□ -0.54
Msh2P43247 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Msh2P43247 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.67□□□□□ -0.54
Msh2P43247 Gm25881-201ENSMUST00000157783 103 ntBASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms