Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Olfr543-202ENSMUST00000219647 1456 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Chd1P40201 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chd1P40201 Cdadc1-202ENSMUST00000056997 2202 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chd1P40201 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chd1P40201 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chd1P40201 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chd1P40201 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chd1P40201 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chd1P40201 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chd1P40201 Gstm6-204ENSMUST00000106684 1179 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chd1P40201 Gm13071-201ENSMUST00000122237 376 ntBASIC16.61■□□□□ 0.25
Chd1P40201 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC16.61■□□□□ 0.25
Chd1P40201 Gm42710-201ENSMUST00000200608 985 ntBASIC16.61■□□□□ 0.25
Chd1P40201 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC16.61■□□□□ 0.25
Chd1P40201 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Chd1P40201 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chd1P40201 Serpina1b-201ENSMUST00000095450 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chd1P40201 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chd1P40201 Gm6721-201ENSMUST00000218353 1445 ntBASIC16.61■□□□□ 0.25
Chd1P40201 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chd1P40201 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chd1P40201 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd1P40201 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd1P40201 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd1P40201 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd1P40201 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd1P40201 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd1P40201 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Chd1P40201 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd1P40201 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd1P40201 Crisp4-203ENSMUST00000115344 960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd1P40201 Atad3aos-204ENSMUST00000174185 482 ntTSL 3 BASIC16.6■□□□□ 0.25
Chd1P40201 A430073D23Rik-201ENSMUST00000196262 665 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chd1P40201 Gm42821-201ENSMUST00000199771 489 ntBASIC16.6■□□□□ 0.25
Chd1P40201 Gm18783-201ENSMUST00000220465 1151 ntBASIC16.6■□□□□ 0.25
Chd1P40201 CT025538.1-201ENSMUST00000223638 369 ntBASIC16.6■□□□□ 0.25
Chd1P40201 Gm8186-201ENSMUST00000053575 386 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Chd1P40201 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd1P40201 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd1P40201 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd1P40201 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Chd1P40201 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC16.6■□□□□ 0.25
Chd1P40201 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chd1P40201 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chd1P40201 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd1P40201 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd1P40201 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chd1P40201 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chd1P40201 Spaca9-201ENSMUST00000102877 671 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd1P40201 Rplp1-ps1-201ENSMUST00000119410 345 ntBASIC16.59■□□□□ 0.25
Chd1P40201 Oosp2-201ENSMUST00000121793 677 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd1P40201 Gm11629-201ENSMUST00000123784 384 ntTSL 3 BASIC16.59■□□□□ 0.25
Chd1P40201 Gm29783-201ENSMUST00000219398 369 ntBASIC16.59■□□□□ 0.25
Chd1P40201 Olfr1384-201ENSMUST00000060434 1034 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Chd1P40201 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd1P40201 Gm7001-201ENSMUST00000219384 1465 ntBASIC16.59■□□□□ 0.25
Chd1P40201 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chd1P40201 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chd1P40201 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chd1P40201 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd1P40201 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC16.59■□□□□ 0.25
Chd1P40201 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd1P40201 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chd1P40201 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chd1P40201 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd1P40201 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Chd1P40201 Rgs8-205ENSMUST00000111815 765 ntTSL 5 BASIC16.59■□□□□ 0.25
Chd1P40201 Gm5400-201ENSMUST00000118494 943 ntBASIC16.59■□□□□ 0.25
Chd1P40201 Gm6783-201ENSMUST00000120916 1437 ntBASIC16.59■□□□□ 0.25
Chd1P40201 Serpina1e-202ENSMUST00000122229 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd1P40201 Gm14108-201ENSMUST00000122234 494 ntBASIC16.59■□□□□ 0.25
Chd1P40201 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Chd1P40201 Gm45363-201ENSMUST00000210196 1294 ntBASIC16.59■□□□□ 0.25
Chd1P40201 AC156274.1-201ENSMUST00000219193 634 ntBASIC16.59■□□□□ 0.25
Chd1P40201 1700029N11Rik-203ENSMUST00000220639 1092 ntTSL 5 BASIC16.59■□□□□ 0.25
Chd1P40201 Gm6129-201ENSMUST00000220725 801 ntBASIC16.59■□□□□ 0.25
Chd1P40201 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chd1P40201 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd1P40201 Cd247-202ENSMUST00000027849 1317 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chd1P40201 Myl10-201ENSMUST00000005611 688 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd1P40201 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd1P40201 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chd1P40201 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Chd1P40201 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Chd1P40201 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
Chd1P40201 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Chd1P40201 Gm17435-202ENSMUST00000212699 1998 ntBASIC16.58■□□□□ 0.24
Chd1P40201 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC16.58■□□□□ 0.24
Chd1P40201 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chd1P40201 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chd1P40201 AC154537.1-201ENSMUST00000226101 1304 ntBASIC16.58■□□□□ 0.24
Chd1P40201 Clec4n-202ENSMUST00000112554 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chd1P40201 Gm14524-201ENSMUST00000121066 683 ntBASIC16.58■□□□□ 0.24
Chd1P40201 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC16.58■□□□□ 0.24
Chd1P40201 Elof1-201ENSMUST00000013966 888 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Chd1P40201 Ppp1r2-ps1-201ENSMUST00000178232 621 ntBASIC16.58■□□□□ 0.24
Chd1P40201 H2al1e-201ENSMUST00000178979 494 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Chd1P40201 Ppp1r2-ps6-201ENSMUST00000179333 621 ntBASIC16.58■□□□□ 0.24
Chd1P40201 Gm26913-201ENSMUST00000182391 732 ntBASIC16.58■□□□□ 0.24
Chd1P40201 H2al1b-201ENSMUST00000189531 495 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms