Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nckap1P28660 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.33□□□□□ -0.6
Nckap1P28660 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Nckap1P28660 AC122346.3-201ENSMUST00000223983 306 ntBASIC11.33□□□□□ -0.6
Nckap1P28660 AC164618.2-201ENSMUST00000224770 573 ntBASIC11.33□□□□□ -0.6
Nckap1P28660 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nckap1P28660 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nckap1P28660 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Nckap1P28660 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nckap1P28660 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Nckap1P28660 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Nckap1P28660 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nckap1P28660 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nckap1P28660 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nckap1P28660 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nckap1P28660 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nckap1P28660 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Nckap1P28660 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.33□□□□□ -0.6
Nckap1P28660 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nckap1P28660 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Nckap1P28660 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Nckap1P28660 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Nckap1P28660 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Nckap1P28660 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nckap1P28660 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nckap1P28660 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nckap1P28660 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nckap1P28660 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nckap1P28660 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.32□□□□□ -0.6
Nckap1P28660 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.32□□□□□ -0.6
Nckap1P28660 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.32□□□□□ -0.6
Nckap1P28660 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Nckap1P28660 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nckap1P28660 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nckap1P28660 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Nckap1P28660 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nckap1P28660 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Nckap1P28660 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nckap1P28660 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nckap1P28660 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nckap1P28660 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nckap1P28660 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nckap1P28660 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nckap1P28660 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nckap1P28660 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC11.32□□□□□ -0.6
Nckap1P28660 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC11.32□□□□□ -0.6
Nckap1P28660 Gm4895-201ENSMUST00000181646 1137 ntBASIC11.32□□□□□ -0.6
Nckap1P28660 Gm17798-201ENSMUST00000182282 1035 ntBASIC11.32□□□□□ -0.6
Nckap1P28660 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nckap1P28660 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nckap1P28660 Mt1-202ENSMUST00000211807 1085 ntBASIC11.32□□□□□ -0.6
Nckap1P28660 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC11.32□□□□□ -0.6
Nckap1P28660 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Nckap1P28660 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Nckap1P28660 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Nckap1P28660 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nckap1P28660 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nckap1P28660 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nckap1P28660 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nckap1P28660 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nckap1P28660 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Nckap1P28660 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC11.32□□□□□ -0.6
Nckap1P28660 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nckap1P28660 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nckap1P28660 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nckap1P28660 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nckap1P28660 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nckap1P28660 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.32□□□□□ -0.6
Nckap1P28660 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nckap1P28660 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Nckap1P28660 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nckap1P28660 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nckap1P28660 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nckap1P28660 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nckap1P28660 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nckap1P28660 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Nckap1P28660 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nckap1P28660 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nckap1P28660 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nckap1P28660 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC11.31□□□□□ -0.6
Nckap1P28660 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nckap1P28660 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nckap1P28660 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.31□□□□□ -0.6
Nckap1P28660 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.31□□□□□ -0.6
Nckap1P28660 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nckap1P28660 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Nckap1P28660 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nckap1P28660 Gm30671-201ENSMUST00000214898 318 ntBASIC11.31□□□□□ -0.6
Nckap1P28660 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nckap1P28660 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC11.31□□□□□ -0.6
Nckap1P28660 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nckap1P28660 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nckap1P28660 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nckap1P28660 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nckap1P28660 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Nckap1P28660 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nckap1P28660 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Nckap1P28660 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nckap1P28660 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nckap1P28660 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms