Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nfkb1P25799 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nfkb1P25799 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nfkb1P25799 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nfkb1P25799 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nfkb1P25799 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Nfkb1P25799 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.69□□□□□ -0.54
Nfkb1P25799 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.69□□□□□ -0.54
Nfkb1P25799 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nfkb1P25799 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC11.69□□□□□ -0.54
Nfkb1P25799 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC11.69□□□□□ -0.54
Nfkb1P25799 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC11.69□□□□□ -0.54
Nfkb1P25799 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Nfkb1P25799 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC11.69□□□□□ -0.54
Nfkb1P25799 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.69□□□□□ -0.54
Nfkb1P25799 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nfkb1P25799 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nfkb1P25799 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nfkb1P25799 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Nfkb1P25799 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Nfkb1P25799 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nfkb1P25799 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Nfkb1P25799 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.69□□□□□ -0.54
Nfkb1P25799 Gm37102-201ENSMUST00000195740 1105 ntBASIC11.69□□□□□ -0.54
Nfkb1P25799 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC11.69□□□□□ -0.54
Nfkb1P25799 Gm43380-201ENSMUST00000200421 220 ntBASIC11.69□□□□□ -0.54
Nfkb1P25799 Gm44008-201ENSMUST00000204345 412 ntBASIC11.69□□□□□ -0.54
Nfkb1P25799 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC11.69□□□□□ -0.54
Nfkb1P25799 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC11.69□□□□□ -0.54
Nfkb1P25799 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Nfkb1P25799 Gm45410-201ENSMUST00000211331 1093 ntBASIC11.69□□□□□ -0.54
Nfkb1P25799 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC11.69□□□□□ -0.54
Nfkb1P25799 Gm45758-201ENSMUST00000212448 1006 ntBASIC11.69□□□□□ -0.54
Nfkb1P25799 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC11.69□□□□□ -0.54
Nfkb1P25799 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nfkb1P25799 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Nfkb1P25799 AC122346.3-201ENSMUST00000223983 306 ntBASIC11.69□□□□□ -0.54
Nfkb1P25799 AC174797.2-202ENSMUST00000225729 568 ntBASIC11.69□□□□□ -0.54
Nfkb1P25799 AC099645.1-201ENSMUST00000226476 1105 ntBASIC11.69□□□□□ -0.54
Nfkb1P25799 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nfkb1P25799 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nfkb1P25799 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nfkb1P25799 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nfkb1P25799 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Nfkb1P25799 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nfkb1P25799 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nfkb1P25799 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Nfkb1P25799 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.69□□□□□ -0.54
Nfkb1P25799 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.69□□□□□ -0.54
Nfkb1P25799 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nfkb1P25799 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Nfkb1P25799 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nfkb1P25799 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.69□□□□□ -0.54
Nfkb1P25799 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nfkb1P25799 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Nfkb1P25799 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nfkb1P25799 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nfkb1P25799 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nfkb1P25799 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.69□□□□□ -0.54
Nfkb1P25799 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nfkb1P25799 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nfkb1P25799 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nfkb1P25799 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.68□□□□□ -0.54
Nfkb1P25799 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nfkb1P25799 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nfkb1P25799 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.68□□□□□ -0.54
Nfkb1P25799 Gm25148-201ENSMUST00000104611 123 ntBASIC11.68□□□□□ -0.54
Nfkb1P25799 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nfkb1P25799 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC11.68□□□□□ -0.54
Nfkb1P25799 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nfkb1P25799 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nfkb1P25799 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC11.68□□□□□ -0.54
Nfkb1P25799 Gm21778-201ENSMUST00000178779 471 ntBASIC11.68□□□□□ -0.54
Nfkb1P25799 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.68□□□□□ -0.54
Nfkb1P25799 Gm19015-201ENSMUST00000184002 1189 ntBASIC11.68□□□□□ -0.54
Nfkb1P25799 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Nfkb1P25799 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC11.68□□□□□ -0.54
Nfkb1P25799 Gm8436-201ENSMUST00000210152 1080 ntBASIC11.68□□□□□ -0.54
Nfkb1P25799 Gm5749-201ENSMUST00000210673 1090 ntBASIC11.68□□□□□ -0.54
Nfkb1P25799 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC11.68□□□□□ -0.54
Nfkb1P25799 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.68□□□□□ -0.54
Nfkb1P25799 AC164618.2-201ENSMUST00000224770 573 ntBASIC11.68□□□□□ -0.54
Nfkb1P25799 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Nfkb1P25799 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Nfkb1P25799 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nfkb1P25799 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Nfkb1P25799 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nfkb1P25799 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nfkb1P25799 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.68□□□□□ -0.54
Nfkb1P25799 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nfkb1P25799 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.67□□□□□ -0.54
Nfkb1P25799 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nfkb1P25799 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Nfkb1P25799 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nfkb1P25799 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nfkb1P25799 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nfkb1P25799 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Nfkb1P25799 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nfkb1P25799 AC130823.1-201ENSMUST00000228929 1549 ntBASIC11.67□□□□□ -0.54
Nfkb1P25799 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms