Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Col8a2P25318 Gm9353-201ENSMUST00000200472 604 ntBASIC9.45□□□□□ -0.9
Col8a2P25318 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC9.45□□□□□ -0.9
Col8a2P25318 Gm45592-201ENSMUST00000209605 1043 ntBASIC9.45□□□□□ -0.9
Col8a2P25318 CT010506.1-201ENSMUST00000223673 349 ntBASIC9.45□□□□□ -0.9
Col8a2P25318 AC164618.2-201ENSMUST00000224770 573 ntBASIC9.45□□□□□ -0.9
Col8a2P25318 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Col8a2P25318 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col8a2P25318 Gm9873-201ENSMUST00000063891 1097 ntBASIC9.45□□□□□ -0.9
Col8a2P25318 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col8a2P25318 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col8a2P25318 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Col8a2P25318 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col8a2P25318 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col8a2P25318 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col8a2P25318 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col8a2P25318 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC9.45□□□□□ -0.9
Col8a2P25318 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Col8a2P25318 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col8a2P25318 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col8a2P25318 AC130823.1-201ENSMUST00000228929 1549 ntBASIC9.45□□□□□ -0.9
Col8a2P25318 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Col8a2P25318 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Col8a2P25318 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Col8a2P25318 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Col8a2P25318 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Col8a2P25318 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col8a2P25318 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Col8a2P25318 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col8a2P25318 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Col8a2P25318 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
Col8a2P25318 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Col8a2P25318 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Col8a2P25318 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Col8a2P25318 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Col8a2P25318 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC9.44□□□□□ -0.9
Col8a2P25318 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC9.44□□□□□ -0.9
Col8a2P25318 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Col8a2P25318 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Col8a2P25318 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Col8a2P25318 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Col8a2P25318 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC9.44□□□□□ -0.9
Col8a2P25318 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Col8a2P25318 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Col8a2P25318 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Col8a2P25318 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Col8a2P25318 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC9.44□□□□□ -0.9
Col8a2P25318 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Col8a2P25318 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC9.44□□□□□ -0.9
Col8a2P25318 Gm25766-201ENSMUST00000104101 131 ntBASIC9.44□□□□□ -0.9
Col8a2P25318 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Col8a2P25318 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC9.44□□□□□ -0.9
Col8a2P25318 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC9.44□□□□□ -0.9
Col8a2P25318 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC9.44□□□□□ -0.9
Col8a2P25318 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC9.44□□□□□ -0.9
Col8a2P25318 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Col8a2P25318 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC9.44□□□□□ -0.9
Col8a2P25318 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC9.44□□□□□ -0.9
Col8a2P25318 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Col8a2P25318 Gm23153-201ENSMUST00000175323 313 ntBASIC9.44□□□□□ -0.9
Col8a2P25318 Mir6958-201ENSMUST00000184207 73 ntBASIC9.44□□□□□ -0.9
Col8a2P25318 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC9.44□□□□□ -0.9
Col8a2P25318 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC9.44□□□□□ -0.9
Col8a2P25318 Gm8197-202ENSMUST00000193422 934 ntBASIC9.44□□□□□ -0.9
Col8a2P25318 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC9.44□□□□□ -0.9
Col8a2P25318 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC9.44□□□□□ -0.9
Col8a2P25318 Mt1-202ENSMUST00000211807 1085 ntBASIC9.44□□□□□ -0.9
Col8a2P25318 AC134248.1-201ENSMUST00000216113 1176 ntBASIC9.44□□□□□ -0.9
Col8a2P25318 AC122891.1-201ENSMUST00000218671 268 ntBASIC9.44□□□□□ -0.9
Col8a2P25318 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC9.44□□□□□ -0.9
Col8a2P25318 Gm19009-201ENSMUST00000223072 823 ntBASIC9.44□□□□□ -0.9
Col8a2P25318 Lgi3-203ENSMUST00000226548 1001 ntBASIC9.44□□□□□ -0.9
Col8a2P25318 AC159002.1-201ENSMUST00000226714 924 ntBASIC9.44□□□□□ -0.9
Col8a2P25318 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Col8a2P25318 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Col8a2P25318 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Col8a2P25318 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Col8a2P25318 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC9.44□□□□□ -0.9
Col8a2P25318 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Col8a2P25318 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Col8a2P25318 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC9.44□□□□□ -0.9
Col8a2P25318 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC9.44□□□□□ -0.9
Col8a2P25318 Gm10728-201ENSMUST00000194292 1829 ntBASIC9.44□□□□□ -0.9
Col8a2P25318 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC9.44□□□□□ -0.9
Col8a2P25318 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC9.44□□□□□ -0.9
Col8a2P25318 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Col8a2P25318 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Col8a2P25318 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Col8a2P25318 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Col8a2P25318 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Col8a2P25318 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC9.43□□□□□ -0.9
Col8a2P25318 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC9.43□□□□□ -0.9
Col8a2P25318 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Col8a2P25318 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Col8a2P25318 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Col8a2P25318 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Col8a2P25318 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Col8a2P25318 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Col8a2P25318 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Col8a2P25318 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms