Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tnfrsf1aP25118 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Tnfrsf1aP25118 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tnfrsf1aP25118 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tnfrsf1aP25118 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Tnfrsf1aP25118 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Tnfrsf1aP25118 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Gm5740-201ENSMUST00000211003 1857 ntBASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Gm13326-201ENSMUST00000118730 1011 ntBASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Gm18734-201ENSMUST00000172937 808 ntBASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Gm10807-201ENSMUST00000177134 795 ntBASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Ighv1-48-201ENSMUST00000191795 294 ntBASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC9.49□□□□□ -0.89
Tnfrsf1aP25118 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tnfrsf1aP25118 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Tnfrsf1aP25118 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC9.48□□□□□ -0.89
Tnfrsf1aP25118 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tnfrsf1aP25118 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Tnfrsf1aP25118 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tnfrsf1aP25118 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Tnfrsf1aP25118 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tnfrsf1aP25118 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tnfrsf1aP25118 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC9.48□□□□□ -0.89
Tnfrsf1aP25118 AC113441.2-201ENSMUST00000221538 1468 ntBASIC9.48□□□□□ -0.89
Tnfrsf1aP25118 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tnfrsf1aP25118 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC9.48□□□□□ -0.89
Tnfrsf1aP25118 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Tnfrsf1aP25118 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tnfrsf1aP25118 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Tnfrsf1aP25118 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Tnfrsf1aP25118 AC154404.1-201ENSMUST00000223601 2077 ntBASIC9.48□□□□□ -0.89
Tnfrsf1aP25118 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tnfrsf1aP25118 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Tnfrsf1aP25118 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tnfrsf1aP25118 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tnfrsf1aP25118 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Tnfrsf1aP25118 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Tnfrsf1aP25118 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tnfrsf1aP25118 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tnfrsf1aP25118 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC9.48□□□□□ -0.89
Tnfrsf1aP25118 Gm12463-201ENSMUST00000118271 849 ntBASIC9.48□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 114.1 ms