Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Clk1P22518 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Clk1P22518 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Clk1P22518 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Clk1P22518 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC10.69□□□□□ -0.7
Clk1P22518 Gm15236-201ENSMUST00000117309 379 ntBASIC10.69□□□□□ -0.7
Clk1P22518 Gm11663-201ENSMUST00000117888 290 ntBASIC10.69□□□□□ -0.7
Clk1P22518 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Clk1P22518 Gm15207-201ENSMUST00000119259 442 ntBASIC10.69□□□□□ -0.7
Clk1P22518 Gm8566-201ENSMUST00000120174 465 ntBASIC10.69□□□□□ -0.7
Clk1P22518 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC10.69□□□□□ -0.7
Clk1P22518 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Clk1P22518 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC10.69□□□□□ -0.7
Clk1P22518 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Clk1P22518 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.69□□□□□ -0.7
Clk1P22518 H2-Q3-201ENSMUST00000172583 608 ntBASIC10.69□□□□□ -0.7
Clk1P22518 Gm8815-201ENSMUST00000173809 620 ntBASIC10.69□□□□□ -0.7
Clk1P22518 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Clk1P22518 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Clk1P22518 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Clk1P22518 Gm2260-201ENSMUST00000184965 657 ntBASIC10.69□□□□□ -0.7
Clk1P22518 Gm38117-201ENSMUST00000194653 939 ntBASIC10.69□□□□□ -0.7
Clk1P22518 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC10.69□□□□□ -0.7
Clk1P22518 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.69□□□□□ -0.7
Clk1P22518 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Clk1P22518 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Clk1P22518 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Clk1P22518 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC10.69□□□□□ -0.7
Clk1P22518 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Clk1P22518 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Clk1P22518 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Clk1P22518 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Clk1P22518 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Clk1P22518 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.69□□□□□ -0.7
Clk1P22518 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Clk1P22518 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Clk1P22518 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Clk1P22518 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
Clk1P22518 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Clk1P22518 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC10.69□□□□□ -0.7
Clk1P22518 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Clk1P22518 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Clk1P22518 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Clk1P22518 Havcr1-202ENSMUST00000081819 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Clk1P22518 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Clk1P22518 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC10.68□□□□□ -0.7
Clk1P22518 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Clk1P22518 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC10.68□□□□□ -0.7
Clk1P22518 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Clk1P22518 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
Clk1P22518 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Clk1P22518 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Clk1P22518 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.68□□□□□ -0.7
Clk1P22518 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Clk1P22518 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Clk1P22518 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Clk1P22518 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Clk1P22518 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.68□□□□□ -0.7
Clk1P22518 Ctc1-211ENSMUST00000161455 3989 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
Clk1P22518 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC10.68□□□□□ -0.7
Clk1P22518 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Clk1P22518 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Clk1P22518 Tmem150c-201ENSMUST00000063192 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Clk1P22518 Aqp7-202ENSMUST00000054945 2154 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Clk1P22518 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Clk1P22518 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Clk1P22518 Gm11509-201ENSMUST00000117358 325 ntBASIC10.68□□□□□ -0.7
Clk1P22518 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
Clk1P22518 Gm12196-201ENSMUST00000120954 262 ntBASIC10.68□□□□□ -0.7
Clk1P22518 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Clk1P22518 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Clk1P22518 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC10.68□□□□□ -0.7
Clk1P22518 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Clk1P22518 Gm8100-201ENSMUST00000182906 988 ntBASIC10.68□□□□□ -0.7
Clk1P22518 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Clk1P22518 Ighv1-48-201ENSMUST00000191795 294 ntBASIC10.68□□□□□ -0.7
Clk1P22518 Gstp-ps-201ENSMUST00000195526 631 ntBASIC10.68□□□□□ -0.7
Clk1P22518 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Clk1P22518 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Clk1P22518 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC10.68□□□□□ -0.7
Clk1P22518 Gm21027-201ENSMUST00000219300 1236 ntBASIC10.68□□□□□ -0.7
Clk1P22518 CT030182.1-201ENSMUST00000225935 533 ntBASIC10.68□□□□□ -0.7
Clk1P22518 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Clk1P22518 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC10.68□□□□□ -0.7
Clk1P22518 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Clk1P22518 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Clk1P22518 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Clk1P22518 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Clk1P22518 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Clk1P22518 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Clk1P22518 AC153380.1-201ENSMUST00000214959 2364 ntBASIC10.68□□□□□ -0.7
Clk1P22518 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Clk1P22518 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Clk1P22518 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Clk1P22518 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Clk1P22518 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Clk1P22518 Gm11497-201ENSMUST00000138295 2154 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Clk1P22518 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Clk1P22518 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Clk1P22518 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms