Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hmgn1P18608 AC155245.1-201ENSMUST00000222266 1804 ntBASIC10.34□□□□□ -0.75
Hmgn1P18608 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hmgn1P18608 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
Hmgn1P18608 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hmgn1P18608 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Hmgn1P18608 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hmgn1P18608 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hmgn1P18608 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Hmgn1P18608 Gm17244-201ENSMUST00000192482 3416 ntBASIC10.34□□□□□ -0.75
Hmgn1P18608 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hmgn1P18608 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Hmgn1P18608 Gm9129-201ENSMUST00000218173 1689 ntBASIC10.34□□□□□ -0.75
Hmgn1P18608 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Hmgn1P18608 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hmgn1P18608 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC10.34□□□□□ -0.75
Hmgn1P18608 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hmgn1P18608 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Hmgn1P18608 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hmgn1P18608 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.75
Hmgn1P18608 Gm28424-201ENSMUST00000187393 1319 ntBASIC10.33□□□□□ -0.76
Hmgn1P18608 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Hmgn1P18608 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Hmgn1P18608 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hmgn1P18608 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC10.33□□□□□ -0.76
Hmgn1P18608 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hmgn1P18608 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.33□□□□□ -0.76
Hmgn1P18608 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hmgn1P18608 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC10.33□□□□□ -0.76
Hmgn1P18608 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Hmgn1P18608 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hmgn1P18608 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Hmgn1P18608 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC10.33□□□□□ -0.76
Hmgn1P18608 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC10.33□□□□□ -0.76
Hmgn1P18608 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Hmgn1P18608 Gm2991-201ENSMUST00000173338 480 ntBASIC10.33□□□□□ -0.76
Hmgn1P18608 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC10.33□□□□□ -0.76
Hmgn1P18608 Gm45856-201ENSMUST00000212752 416 ntBASIC10.33□□□□□ -0.76
Hmgn1P18608 AC123665.1-201ENSMUST00000228204 438 ntBASIC10.33□□□□□ -0.76
Hmgn1P18608 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hmgn1P18608 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hmgn1P18608 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Hmgn1P18608 Gm5537-201ENSMUST00000091117 1252 ntBASIC10.33□□□□□ -0.76
Hmgn1P18608 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Hmgn1P18608 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Hmgn1P18608 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hmgn1P18608 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hmgn1P18608 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hmgn1P18608 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Hmgn1P18608 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
Hmgn1P18608 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Hmgn1P18608 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hmgn1P18608 AC174797.1-201ENSMUST00000224339 1649 ntBASIC10.33□□□□□ -0.76
Hmgn1P18608 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC10.33□□□□□ -0.76
Hmgn1P18608 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Hmgn1P18608 Gm8862-201ENSMUST00000198379 1346 ntBASIC10.33□□□□□ -0.76
Hmgn1P18608 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hmgn1P18608 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC10.32□□□□□ -0.76
Hmgn1P18608 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Hmgn1P18608 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Hmgn1P18608 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Hmgn1P18608 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hmgn1P18608 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hmgn1P18608 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hmgn1P18608 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hmgn1P18608 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC10.32□□□□□ -0.76
Hmgn1P18608 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hmgn1P18608 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hmgn1P18608 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Hmgn1P18608 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC10.32□□□□□ -0.76
Hmgn1P18608 Gm15617-201ENSMUST00000118973 771 ntBASIC10.32□□□□□ -0.76
Hmgn1P18608 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Hmgn1P18608 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hmgn1P18608 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Hmgn1P18608 Gm38151-201ENSMUST00000195085 289 ntBASIC10.32□□□□□ -0.76
Hmgn1P18608 AY036118-201ENSMUST00000200021 923 ntBASIC10.32□□□□□ -0.76
Hmgn1P18608 Gm5302-201ENSMUST00000202130 796 ntBASIC10.32□□□□□ -0.76
Hmgn1P18608 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC10.32□□□□□ -0.76
Hmgn1P18608 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Hmgn1P18608 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC10.32□□□□□ -0.76
Hmgn1P18608 Gm6722-201ENSMUST00000221586 390 ntBASIC10.32□□□□□ -0.76
Hmgn1P18608 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hmgn1P18608 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hmgn1P18608 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hmgn1P18608 Gm26448-201ENSMUST00000082446 203 ntBASIC10.32□□□□□ -0.76
Hmgn1P18608 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hmgn1P18608 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hmgn1P18608 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hmgn1P18608 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hmgn1P18608 Gm12799-201ENSMUST00000118151 2560 ntBASIC10.32□□□□□ -0.76
Hmgn1P18608 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Hmgn1P18608 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hmgn1P18608 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hmgn1P18608 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hmgn1P18608 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Hmgn1P18608 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Hmgn1P18608 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hmgn1P18608 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hmgn1P18608 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hmgn1P18608 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms