Protein–RNA interactions for Protein: P04756

Chrna1, Acetylcholine receptor subunit alpha, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna1P04756 Gm35713-201ENSMUST00000210516 199 ntBASIC12.16□□□□□ -0.46
Chrna1P04756 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC12.16□□□□□ -0.46
Chrna1P04756 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Chrna1P04756 AC158392.3-201ENSMUST00000224271 1284 ntBASIC12.16□□□□□ -0.46
Chrna1P04756 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Chrna1P04756 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chrna1P04756 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Chrna1P04756 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Chrna1P04756 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chrna1P04756 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chrna1P04756 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chrna1P04756 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Chrna1P04756 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chrna1P04756 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.16□□□□□ -0.46
Chrna1P04756 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chrna1P04756 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chrna1P04756 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chrna1P04756 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.16□□□□□ -0.46
Chrna1P04756 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC12.16□□□□□ -0.46
Chrna1P04756 Gm5822-201ENSMUST00000161562 1378 ntBASIC12.16□□□□□ -0.46
Chrna1P04756 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chrna1P04756 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Chrna1P04756 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Chrna1P04756 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna1P04756 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna1P04756 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Chrna1P04756 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Chrna1P04756 Gm15784-201ENSMUST00000120260 1462 ntBASIC12.15□□□□□ -0.46
Chrna1P04756 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Chrna1P04756 Adgrv1-214ENSMUST00000224088 1492 ntBASIC12.15□□□□□ -0.46
Chrna1P04756 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna1P04756 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna1P04756 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna1P04756 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna1P04756 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna1P04756 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Chrna1P04756 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna1P04756 Gm14398-201ENSMUST00000117287 1073 ntBASIC12.15□□□□□ -0.46
Chrna1P04756 Gm13351-201ENSMUST00000118087 414 ntBASIC12.15□□□□□ -0.46
Chrna1P04756 Gm13445-201ENSMUST00000121664 307 ntBASIC12.15□□□□□ -0.46
Chrna1P04756 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC12.15□□□□□ -0.46
Chrna1P04756 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna1P04756 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Chrna1P04756 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna1P04756 Snord55-201ENSMUST00000174939 79 ntBASIC12.15□□□□□ -0.46
Chrna1P04756 Gm19013-201ENSMUST00000183895 1222 ntBASIC12.15□□□□□ -0.46
Chrna1P04756 Gm19014-201ENSMUST00000184828 1189 ntBASIC12.15□□□□□ -0.46
Chrna1P04756 Gm37365-201ENSMUST00000193109 409 ntBASIC12.15□□□□□ -0.46
Chrna1P04756 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna1P04756 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC12.15□□□□□ -0.46
Chrna1P04756 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC12.15□□□□□ -0.46
Chrna1P04756 Gm7959-201ENSMUST00000221823 1078 ntBASIC12.15□□□□□ -0.46
Chrna1P04756 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC12.15□□□□□ -0.46
Chrna1P04756 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna1P04756 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna1P04756 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna1P04756 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Chrna1P04756 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna1P04756 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna1P04756 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna1P04756 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna1P04756 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna1P04756 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna1P04756 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.15□□□□□ -0.46
Chrna1P04756 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna1P04756 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna1P04756 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna1P04756 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna1P04756 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna1P04756 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna1P04756 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Chrna1P04756 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Chrna1P04756 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Chrna1P04756 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Chrna1P04756 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Chrna1P04756 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chrna1P04756 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Chrna1P04756 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chrna1P04756 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Chrna1P04756 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chrna1P04756 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chrna1P04756 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.14□□□□□ -0.47
Chrna1P04756 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chrna1P04756 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.14□□□□□ -0.47
Chrna1P04756 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chrna1P04756 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Chrna1P04756 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC12.14□□□□□ -0.47
Chrna1P04756 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.14□□□□□ -0.47
Chrna1P04756 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chrna1P04756 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chrna1P04756 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Chrna1P04756 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chrna1P04756 Gm25562-201ENSMUST00000104608 133 ntBASIC12.14□□□□□ -0.47
Chrna1P04756 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chrna1P04756 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Chrna1P04756 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Chrna1P04756 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC12.14□□□□□ -0.47
Chrna1P04756 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC12.14□□□□□ -0.47
Chrna1P04756 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC12.14□□□□□ -0.47
Chrna1P04756 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms