Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
P01852 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC10.4□□□□□ -0.74
P01852 AC166344.1-201ENSMUST00000223745 674 ntBASIC10.4□□□□□ -0.74
P01852 AC154849.4-201ENSMUST00000224868 365 ntBASIC10.4□□□□□ -0.74
P01852 AC171241.1-201ENSMUST00000228144 1166 ntBASIC10.4□□□□□ -0.74
P01852 Olfr584-201ENSMUST00000098210 964 ntBASIC10.4□□□□□ -0.74
P01852 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC10.4□□□□□ -0.74
P01852 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
P01852 Gm42141-201ENSMUST00000196534 2172 ntBASIC10.4□□□□□ -0.74
P01852 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
P01852 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
P01852 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
P01852 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
P01852 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
P01852 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
P01852 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
P01852 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
P01852 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
P01852 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
P01852 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
P01852 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC10.4□□□□□ -0.75
P01852 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
P01852 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.75
P01852 Gm14150-201ENSMUST00000122404 1354 ntBASIC10.39□□□□□ -0.75
P01852 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
P01852 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
P01852 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
P01852 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC10.39□□□□□ -0.75
P01852 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
P01852 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
P01852 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
P01852 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
P01852 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
P01852 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
P01852 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
P01852 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
P01852 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
P01852 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
P01852 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
P01852 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
P01852 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
P01852 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
P01852 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
P01852 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
P01852 Gm11244-201ENSMUST00000121243 237 ntBASIC10.39□□□□□ -0.75
P01852 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC10.39□□□□□ -0.75
P01852 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
P01852 Gm20495-201ENSMUST00000173902 235 ntBASIC10.39□□□□□ -0.75
P01852 Gm5523-201ENSMUST00000180415 997 ntBASIC10.39□□□□□ -0.75
P01852 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC10.39□□□□□ -0.75
P01852 Gm8574-201ENSMUST00000203207 924 ntBASIC10.39□□□□□ -0.75
P01852 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
P01852 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC10.39□□□□□ -0.75
P01852 Gm45398-201ENSMUST00000210561 165 ntBASIC10.39□□□□□ -0.75
P01852 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
P01852 CT009546.1-201ENSMUST00000222573 1120 ntBASIC10.39□□□□□ -0.75
P01852 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
P01852 Gm10179-201ENSMUST00000086233 688 ntBASIC10.39□□□□□ -0.75
P01852 Gm8420-201ENSMUST00000097103 598 ntBASIC10.39□□□□□ -0.75
P01852 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC10.39□□□□□ -0.75
P01852 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
P01852 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
P01852 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
P01852 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
P01852 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
P01852 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
P01852 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
P01852 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC10.39□□□□□ -0.75
P01852 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
P01852 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
P01852 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
P01852 Gm17244-201ENSMUST00000192482 3416 ntBASIC10.39□□□□□ -0.75
P01852 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
P01852 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
P01852 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
P01852 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
P01852 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
P01852 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
P01852 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
P01852 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
P01852 Rgr-203ENSMUST00000225070 4704 ntBASIC10.38□□□□□ -0.75
P01852 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
P01852 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
P01852 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
P01852 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
P01852 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
P01852 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
P01852 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
P01852 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
P01852 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
P01852 Gm15131-201ENSMUST00000119124 595 ntBASIC10.38□□□□□ -0.75
P01852 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC10.38□□□□□ -0.75
P01852 Gm22334-201ENSMUST00000158070 133 ntBASIC10.38□□□□□ -0.75
P01852 Mir8115-201ENSMUST00000184992 119 ntBASIC10.38□□□□□ -0.75
P01852 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC10.38□□□□□ -0.75
P01852 Gm43002-201ENSMUST00000200310 155 ntBASIC10.38□□□□□ -0.75
P01852 Gm7504-201ENSMUST00000201449 424 ntBASIC10.38□□□□□ -0.75
P01852 Gm44421-201ENSMUST00000205064 1221 ntBASIC10.38□□□□□ -0.75
P01852 Gm45770-201ENSMUST00000212105 616 ntBASIC10.38□□□□□ -0.75
P01852 CT485606.1-201ENSMUST00000213187 878 ntBASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms