Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Cxcl13O55038 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC9.59□□□□□ -0.87
Cxcl13O55038 Gm9133-201ENSMUST00000118289 540 ntBASIC9.59□□□□□ -0.87
Cxcl13O55038 Gm9673-201ENSMUST00000119287 781 ntBASIC9.59□□□□□ -0.87
Cxcl13O55038 Gm12791-201ENSMUST00000120788 655 ntBASIC9.59□□□□□ -0.87
Cxcl13O55038 Gm13284-201ENSMUST00000121020 547 ntBASIC9.59□□□□□ -0.87
Cxcl13O55038 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cxcl13O55038 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC9.59□□□□□ -0.87
Cxcl13O55038 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC9.59□□□□□ -0.87
Cxcl13O55038 AC238811.4-201ENSMUST00000178019 1246 ntBASIC9.59□□□□□ -0.87
Cxcl13O55038 AC238940.3-201ENSMUST00000178830 1246 ntBASIC9.59□□□□□ -0.87
Cxcl13O55038 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Cxcl13O55038 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC9.59□□□□□ -0.87
Cxcl13O55038 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC9.59□□□□□ -0.87
Cxcl13O55038 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cxcl13O55038 Gm30946-201ENSMUST00000198288 724 ntBASIC9.59□□□□□ -0.87
Cxcl13O55038 Gm42867-201ENSMUST00000202995 469 ntBASIC9.59□□□□□ -0.87
Cxcl13O55038 Gm18514-201ENSMUST00000218980 436 ntBASIC9.59□□□□□ -0.87
Cxcl13O55038 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Cxcl13O55038 Gm18968-201ENSMUST00000221319 862 ntBASIC9.59□□□□□ -0.87
Cxcl13O55038 AC122035.1-201ENSMUST00000227576 1016 ntBASIC9.59□□□□□ -0.87
Cxcl13O55038 Gm10020-201ENSMUST00000081993 612 ntBASIC9.59□□□□□ -0.87
Cxcl13O55038 n-R5s185-201ENSMUST00000083953 119 ntBASIC9.59□□□□□ -0.87
Cxcl13O55038 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Cxcl13O55038 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cxcl13O55038 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cxcl13O55038 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC9.59□□□□□ -0.87
Cxcl13O55038 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Cxcl13O55038 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Cxcl13O55038 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Cxcl13O55038 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC9.59□□□□□ -0.87
Cxcl13O55038 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cxcl13O55038 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Cxcl13O55038 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cxcl13O55038 Gm9544-201ENSMUST00000223349 2482 ntBASIC9.59□□□□□ -0.87
Cxcl13O55038 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cxcl13O55038 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cxcl13O55038 Gm37660-201ENSMUST00000192754 1732 ntBASIC9.59□□□□□ -0.87
Cxcl13O55038 Gm21759-201ENSMUST00000178345 1828 ntBASIC9.59□□□□□ -0.88
Cxcl13O55038 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.88
Cxcl13O55038 Gm6024-201ENSMUST00000117850 1558 ntBASIC9.58□□□□□ -0.88
Cxcl13O55038 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl13O55038 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl13O55038 AC154537.1-201ENSMUST00000226101 1304 ntBASIC9.58□□□□□ -0.88
Cxcl13O55038 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC9.58□□□□□ -0.88
Cxcl13O55038 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl13O55038 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl13O55038 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl13O55038 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Cxcl13O55038 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Cxcl13O55038 Gm43727-201ENSMUST00000198021 2647 ntBASIC9.58□□□□□ -0.88
Cxcl13O55038 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl13O55038 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl13O55038 Gm9244-201ENSMUST00000056767 2129 ntBASIC9.58□□□□□ -0.88
Cxcl13O55038 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Cxcl13O55038 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Cxcl13O55038 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl13O55038 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl13O55038 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl13O55038 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl13O55038 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl13O55038 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl13O55038 Gm25880-201ENSMUST00000104331 132 ntBASIC9.58□□□□□ -0.88
Cxcl13O55038 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC9.58□□□□□ -0.88
Cxcl13O55038 Gm12990-201ENSMUST00000120372 468 ntBASIC9.58□□□□□ -0.88
Cxcl13O55038 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Cxcl13O55038 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
Cxcl13O55038 Gm28833-201ENSMUST00000189671 559 ntBASIC9.58□□□□□ -0.88
Cxcl13O55038 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC9.58□□□□□ -0.88
Cxcl13O55038 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl13O55038 AC134248.1-201ENSMUST00000216113 1176 ntBASIC9.58□□□□□ -0.88
Cxcl13O55038 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl13O55038 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Cxcl13O55038 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Cxcl13O55038 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl13O55038 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl13O55038 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl13O55038 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC9.58□□□□□ -0.88
Cxcl13O55038 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl13O55038 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl13O55038 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC9.58□□□□□ -0.88
Cxcl13O55038 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Cxcl13O55038 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl13O55038 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl13O55038 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl13O55038 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl13O55038 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Cxcl13O55038 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl13O55038 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl13O55038 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl13O55038 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Cxcl13O55038 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl13O55038 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl13O55038 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Cxcl13O55038 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl13O55038 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl13O55038 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl13O55038 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cxcl13O55038 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC9.57□□□□□ -0.88
Cxcl13O55038 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms