Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Gm37299-201ENSMUST00000193951 826 ntBASIC11.09□□□□□ -0.63
Npc1O35604 Gm5542-201ENSMUST00000195485 1089 ntBASIC11.09□□□□□ -0.63
Npc1O35604 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Npc1O35604 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Npc1O35604 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Npc1O35604 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Npc1O35604 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Npc1O35604 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Npc1O35604 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Npc1O35604 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Npc1O35604 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Npc1O35604 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.09□□□□□ -0.63
Npc1O35604 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Npc1O35604 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Npc1O35604 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Npc1O35604 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Npc1O35604 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Npc1O35604 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Npc1O35604 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.63
Npc1O35604 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.08□□□□□ -0.63
Npc1O35604 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Npc1O35604 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Npc1O35604 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Npc1O35604 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Npc1O35604 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Npc1O35604 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Npc1O35604 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Npc1O35604 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Npc1O35604 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Npc1O35604 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Npc1O35604 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Npc1O35604 Gm4294-201ENSMUST00000105169 614 ntBASIC11.08□□□□□ -0.64
Npc1O35604 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Npc1O35604 Gm11451-201ENSMUST00000118946 630 ntBASIC11.08□□□□□ -0.64
Npc1O35604 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.08□□□□□ -0.64
Npc1O35604 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.08□□□□□ -0.64
Npc1O35604 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC11.08□□□□□ -0.64
Npc1O35604 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.08□□□□□ -0.64
Npc1O35604 Gm18367-201ENSMUST00000176139 600 ntBASIC11.08□□□□□ -0.64
Npc1O35604 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Npc1O35604 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC11.08□□□□□ -0.64
Npc1O35604 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Npc1O35604 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Npc1O35604 Gm44551-201ENSMUST00000208804 171 ntBASIC11.08□□□□□ -0.64
Npc1O35604 AC165260.2-203ENSMUST00000224237 336 ntBASIC11.08□□□□□ -0.64
Npc1O35604 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Npc1O35604 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Npc1O35604 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Npc1O35604 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Npc1O35604 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Npc1O35604 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Npc1O35604 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Npc1O35604 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Npc1O35604 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Npc1O35604 Gm37648-201ENSMUST00000192072 2563 ntBASIC11.08□□□□□ -0.64
Npc1O35604 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.08□□□□□ -0.64
Npc1O35604 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Npc1O35604 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Npc1O35604 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Npc1O35604 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Npc1O35604 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Npc1O35604 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.08□□□□□ -0.64
Npc1O35604 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Npc1O35604 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Npc1O35604 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Npc1O35604 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Npc1O35604 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Npc1O35604 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Npc1O35604 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Npc1O35604 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Npc1O35604 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Npc1O35604 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Npc1O35604 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Npc1O35604 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Npc1O35604 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Npc1O35604 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC11.07□□□□□ -0.64
Npc1O35604 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Npc1O35604 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Npc1O35604 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Npc1O35604 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Npc1O35604 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Npc1O35604 Gm12419-201ENSMUST00000116649 636 ntBASIC11.07□□□□□ -0.64
Npc1O35604 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC11.07□□□□□ -0.64
Npc1O35604 Gm14665-201ENSMUST00000122294 557 ntBASIC11.07□□□□□ -0.64
Npc1O35604 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC11.07□□□□□ -0.64
Npc1O35604 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.07□□□□□ -0.64
Npc1O35604 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC11.07□□□□□ -0.64
Npc1O35604 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Npc1O35604 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Npc1O35604 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC11.07□□□□□ -0.64
Npc1O35604 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC11.07□□□□□ -0.64
Npc1O35604 Gm44315-201ENSMUST00000203041 219 ntBASIC11.07□□□□□ -0.64
Npc1O35604 Gm44126-201ENSMUST00000204831 514 ntBASIC11.07□□□□□ -0.64
Npc1O35604 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC11.07□□□□□ -0.64
Npc1O35604 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.07□□□□□ -0.64
Npc1O35604 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC11.07□□□□□ -0.64
Npc1O35604 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC11.07□□□□□ -0.64
Npc1O35604 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Npc1O35604 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Npc1O35604 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 251.2 ms