Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Polr1aO35134 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Polr1aO35134 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Polr1aO35134 Gm24140-201ENSMUST00000122773 326 ntBASIC17.16■□□□□ 0.34
Polr1aO35134 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC17.16■□□□□ 0.34
Polr1aO35134 Gm5976-201ENSMUST00000180794 996 ntBASIC17.16■□□□□ 0.34
Polr1aO35134 Gm37858-201ENSMUST00000192759 1231 ntBASIC17.16■□□□□ 0.34
Polr1aO35134 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Polr1aO35134 CT030035.1-201ENSMUST00000223964 935 ntBASIC17.16■□□□□ 0.34
Polr1aO35134 AC141884.2-201ENSMUST00000228811 775 ntBASIC17.16■□□□□ 0.34
Polr1aO35134 Gm10238-201ENSMUST00000089689 408 ntBASIC17.16■□□□□ 0.34
Polr1aO35134 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Polr1aO35134 Gm12716-201ENSMUST00000120606 1354 ntBASIC17.15■□□□□ 0.34
Polr1aO35134 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr1aO35134 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr1aO35134 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr1aO35134 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Polr1aO35134 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC17.15■□□□□ 0.34
Polr1aO35134 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr1aO35134 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Polr1aO35134 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Polr1aO35134 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Polr1aO35134 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr1aO35134 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr1aO35134 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr1aO35134 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Polr1aO35134 Gm16518-201ENSMUST00000117960 508 ntBASIC17.15■□□□□ 0.34
Polr1aO35134 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Polr1aO35134 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Polr1aO35134 Gm5244-201ENSMUST00000164001 339 ntBASIC17.15■□□□□ 0.34
Polr1aO35134 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr1aO35134 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC17.15■□□□□ 0.34
Polr1aO35134 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr1aO35134 Gm27444-201ENSMUST00000184157 137 ntBASIC17.15■□□□□ 0.34
Polr1aO35134 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC17.15■□□□□ 0.34
Polr1aO35134 Gm38313-201ENSMUST00000191953 1266 ntBASIC17.15■□□□□ 0.34
Polr1aO35134 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Polr1aO35134 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
Polr1aO35134 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr1aO35134 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Polr1aO35134 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr1aO35134 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Polr1aO35134 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Polr1aO35134 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Polr1aO35134 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC17.15■□□□□ 0.34
Polr1aO35134 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr1aO35134 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Polr1aO35134 AC155298.2-201ENSMUST00000225485 6226 ntBASIC17.14■□□□□ 0.34
Polr1aO35134 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Polr1aO35134 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC17.14■□□□□ 0.33
Polr1aO35134 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Polr1aO35134 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Polr1aO35134 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Polr1aO35134 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr1aO35134 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr1aO35134 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr1aO35134 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC17.14■□□□□ 0.33
Polr1aO35134 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr1aO35134 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr1aO35134 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC17.14■□□□□ 0.33
Polr1aO35134 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC17.14■□□□□ 0.33
Polr1aO35134 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Polr1aO35134 Gm15258-201ENSMUST00000153801 741 ntBASIC17.14■□□□□ 0.33
Polr1aO35134 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr1aO35134 Gm6686-201ENSMUST00000178455 258 ntBASIC17.14■□□□□ 0.33
Polr1aO35134 Gm33707-201ENSMUST00000195135 569 ntBASIC17.14■□□□□ 0.33
Polr1aO35134 Gm43811-201ENSMUST00000202862 695 ntBASIC17.14■□□□□ 0.33
Polr1aO35134 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr1aO35134 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.33
Polr1aO35134 AC117769.1-201ENSMUST00000224716 1120 ntBASIC17.14■□□□□ 0.33
Polr1aO35134 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr1aO35134 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr1aO35134 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Polr1aO35134 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr1aO35134 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr1aO35134 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Polr1aO35134 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Polr1aO35134 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Polr1aO35134 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr1aO35134 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr1aO35134 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr1aO35134 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC17.13■□□□□ 0.33
Polr1aO35134 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Polr1aO35134 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Polr1aO35134 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Polr1aO35134 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC17.13■□□□□ 0.33
Polr1aO35134 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Polr1aO35134 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC17.13■□□□□ 0.33
Polr1aO35134 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC17.13■□□□□ 0.33
Polr1aO35134 AC134860.2-201ENSMUST00000225277 1036 ntBASIC17.13■□□□□ 0.33
Polr1aO35134 AC164883.7-201ENSMUST00000228534 851 ntBASIC17.13■□□□□ 0.33
Polr1aO35134 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Polr1aO35134 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Polr1aO35134 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Polr1aO35134 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Polr1aO35134 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Polr1aO35134 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Polr1aO35134 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Polr1aO35134 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Polr1aO35134 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms