Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NpcdF8VQB8 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
NpcdF8VQB8 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC13.7□□□□□ -0.22
NpcdF8VQB8 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NpcdF8VQB8 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NpcdF8VQB8 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC13.7□□□□□ -0.22
NpcdF8VQB8 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NpcdF8VQB8 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
NpcdF8VQB8 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NpcdF8VQB8 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NpcdF8VQB8 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
NpcdF8VQB8 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
NpcdF8VQB8 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
NpcdF8VQB8 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
NpcdF8VQB8 Gm44086-201ENSMUST00000203251 2349 ntBASIC13.69□□□□□ -0.22
NpcdF8VQB8 Gm8146-201ENSMUST00000192106 1847 ntBASIC13.69□□□□□ -0.22
NpcdF8VQB8 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NpcdF8VQB8 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
NpcdF8VQB8 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NpcdF8VQB8 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
NpcdF8VQB8 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
NpcdF8VQB8 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
NpcdF8VQB8 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
NpcdF8VQB8 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NpcdF8VQB8 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
NpcdF8VQB8 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NpcdF8VQB8 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NpcdF8VQB8 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NpcdF8VQB8 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC13.69□□□□□ -0.22
NpcdF8VQB8 Gm8019-201ENSMUST00000119317 587 ntBASIC13.69□□□□□ -0.22
NpcdF8VQB8 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC13.69□□□□□ -0.22
NpcdF8VQB8 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC13.69□□□□□ -0.22
NpcdF8VQB8 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NpcdF8VQB8 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC13.69□□□□□ -0.22
NpcdF8VQB8 Gm6114-201ENSMUST00000182472 968 ntBASIC13.69□□□□□ -0.22
NpcdF8VQB8 Gm7765-201ENSMUST00000182585 974 ntBASIC13.69□□□□□ -0.22
NpcdF8VQB8 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NpcdF8VQB8 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC13.69□□□□□ -0.22
NpcdF8VQB8 Gm43244-201ENSMUST00000196994 1285 ntBASIC13.69□□□□□ -0.22
NpcdF8VQB8 AC153929.1-201ENSMUST00000219009 303 ntBASIC13.69□□□□□ -0.22
NpcdF8VQB8 Gm8768-201ENSMUST00000220020 826 ntBASIC13.69□□□□□ -0.22
NpcdF8VQB8 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
NpcdF8VQB8 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NpcdF8VQB8 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NpcdF8VQB8 Gm6478-201ENSMUST00000099450 742 ntBASIC13.69□□□□□ -0.22
NpcdF8VQB8 Gm15519-201ENSMUST00000120088 1566 ntBASIC13.69□□□□□ -0.22
NpcdF8VQB8 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
NpcdF8VQB8 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NpcdF8VQB8 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NpcdF8VQB8 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NpcdF8VQB8 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC13.69□□□□□ -0.22
NpcdF8VQB8 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
NpcdF8VQB8 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NpcdF8VQB8 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NpcdF8VQB8 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NpcdF8VQB8 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NpcdF8VQB8 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NpcdF8VQB8 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
NpcdF8VQB8 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
NpcdF8VQB8 Sertm1-202ENSMUST00000162201 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NpcdF8VQB8 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC13.69□□□□□ -0.22
NpcdF8VQB8 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NpcdF8VQB8 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC13.68□□□□□ -0.22
NpcdF8VQB8 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NpcdF8VQB8 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NpcdF8VQB8 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC13.68□□□□□ -0.22
NpcdF8VQB8 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
NpcdF8VQB8 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
NpcdF8VQB8 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NpcdF8VQB8 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NpcdF8VQB8 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
NpcdF8VQB8 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NpcdF8VQB8 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NpcdF8VQB8 Gm37014-201ENSMUST00000194723 2253 ntBASIC13.68□□□□□ -0.22
NpcdF8VQB8 Gm12129-201ENSMUST00000120104 1147 ntBASIC13.68□□□□□ -0.22
NpcdF8VQB8 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC13.68□□□□□ -0.22
NpcdF8VQB8 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NpcdF8VQB8 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC13.68□□□□□ -0.22
NpcdF8VQB8 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC13.68□□□□□ -0.22
NpcdF8VQB8 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC13.68□□□□□ -0.22
NpcdF8VQB8 Gm4982-201ENSMUST00000160440 1098 ntBASIC13.68□□□□□ -0.22
NpcdF8VQB8 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NpcdF8VQB8 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.68□□□□□ -0.22
NpcdF8VQB8 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC13.68□□□□□ -0.22
NpcdF8VQB8 AC115304.2-201ENSMUST00000226399 332 ntBASIC13.68□□□□□ -0.22
NpcdF8VQB8 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
NpcdF8VQB8 Rps3a2-201ENSMUST00000074245 792 ntBASIC13.68□□□□□ -0.22
NpcdF8VQB8 Rps3a3-201ENSMUST00000074680 795 ntBASIC13.68□□□□□ -0.22
NpcdF8VQB8 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
NpcdF8VQB8 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NpcdF8VQB8 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NpcdF8VQB8 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
NpcdF8VQB8 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NpcdF8VQB8 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NpcdF8VQB8 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NpcdF8VQB8 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NpcdF8VQB8 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NpcdF8VQB8 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NpcdF8VQB8 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NpcdF8VQB8 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms