Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
TprF6ZDS4 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
TprF6ZDS4 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
TprF6ZDS4 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
TprF6ZDS4 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
TprF6ZDS4 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
TprF6ZDS4 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
TprF6ZDS4 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC10.49□□□□□ -0.73
TprF6ZDS4 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
TprF6ZDS4 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
TprF6ZDS4 Rnf17-202ENSMUST00000223627 2077 ntBASIC10.49□□□□□ -0.73
TprF6ZDS4 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
TprF6ZDS4 Sidt2-202ENSMUST00000114573 4012 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
TprF6ZDS4 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
TprF6ZDS4 Gm14524-201ENSMUST00000121066 683 ntBASIC10.49□□□□□ -0.73
TprF6ZDS4 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
TprF6ZDS4 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
TprF6ZDS4 Gm24294-201ENSMUST00000158295 277 ntBASIC10.49□□□□□ -0.73
TprF6ZDS4 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
TprF6ZDS4 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
TprF6ZDS4 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
TprF6ZDS4 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
TprF6ZDS4 Gm4895-201ENSMUST00000181646 1137 ntBASIC10.49□□□□□ -0.73
TprF6ZDS4 Gm43547-201ENSMUST00000197729 328 ntBASIC10.49□□□□□ -0.73
TprF6ZDS4 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
TprF6ZDS4 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
TprF6ZDS4 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
TprF6ZDS4 AC116503.1-201ENSMUST00000215445 2192 ntBASIC10.49□□□□□ -0.73
TprF6ZDS4 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
TprF6ZDS4 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC10.49□□□□□ -0.73
TprF6ZDS4 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.49□□□□□ -0.73
TprF6ZDS4 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC10.49□□□□□ -0.73
TprF6ZDS4 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
TprF6ZDS4 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
TprF6ZDS4 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
TprF6ZDS4 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
TprF6ZDS4 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
TprF6ZDS4 Gm12194-201ENSMUST00000117756 1012 ntBASIC10.48□□□□□ -0.73
TprF6ZDS4 Gm14071-201ENSMUST00000117817 509 ntBASIC10.48□□□□□ -0.73
TprF6ZDS4 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.48□□□□□ -0.73
TprF6ZDS4 Gm26670-202ENSMUST00000226862 340 ntBASIC10.48□□□□□ -0.73
TprF6ZDS4 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
TprF6ZDS4 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
TprF6ZDS4 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
TprF6ZDS4 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
TprF6ZDS4 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
TprF6ZDS4 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
TprF6ZDS4 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
TprF6ZDS4 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
TprF6ZDS4 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
TprF6ZDS4 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
TprF6ZDS4 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
TprF6ZDS4 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
TprF6ZDS4 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC10.48□□□□□ -0.73
TprF6ZDS4 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
TprF6ZDS4 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC10.48□□□□□ -0.73
TprF6ZDS4 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
TprF6ZDS4 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC10.48□□□□□ -0.73
TprF6ZDS4 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC10.48□□□□□ -0.73
TprF6ZDS4 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
TprF6ZDS4 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
TprF6ZDS4 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
TprF6ZDS4 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC10.48□□□□□ -0.73
TprF6ZDS4 Mir598-201ENSMUST00000102094 79 ntBASIC10.48□□□□□ -0.73
TprF6ZDS4 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
TprF6ZDS4 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.48□□□□□ -0.73
TprF6ZDS4 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC10.48□□□□□ -0.73
TprF6ZDS4 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
TprF6ZDS4 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC10.48□□□□□ -0.73
TprF6ZDS4 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC10.48□□□□□ -0.73
TprF6ZDS4 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.48□□□□□ -0.73
TprF6ZDS4 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
TprF6ZDS4 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.48□□□□□ -0.73
TprF6ZDS4 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
TprF6ZDS4 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
TprF6ZDS4 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
TprF6ZDS4 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
TprF6ZDS4 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
TprF6ZDS4 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
TprF6ZDS4 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
TprF6ZDS4 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
TprF6ZDS4 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
TprF6ZDS4 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
TprF6ZDS4 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
TprF6ZDS4 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
TprF6ZDS4 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
TprF6ZDS4 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
TprF6ZDS4 Gm23745-201ENSMUST00000104230 125 ntBASIC10.47□□□□□ -0.73
TprF6ZDS4 1700017J07Rik-201ENSMUST00000140241 473 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
TprF6ZDS4 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.47□□□□□ -0.73
TprF6ZDS4 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
TprF6ZDS4 Zcwpw2-203ENSMUST00000187803 372 ntBASIC10.47□□□□□ -0.73
TprF6ZDS4 Gm37872-201ENSMUST00000192362 886 ntTSL 5 BASIC10.47□□□□□ -0.73
TprF6ZDS4 Gm2566-201ENSMUST00000201267 431 ntBASIC10.47□□□□□ -0.73
TprF6ZDS4 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC10.47□□□□□ -0.73
TprF6ZDS4 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC10.47□□□□□ -0.73
TprF6ZDS4 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
TprF6ZDS4 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC10.47□□□□□ -0.73
TprF6ZDS4 AC164099.1-201ENSMUST00000227780 333 ntBASIC10.47□□□□□ -0.73
TprF6ZDS4 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms