Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hfm1D3Z4R1 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hfm1D3Z4R1 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hfm1D3Z4R1 Gm45090-201ENSMUST00000208775 1148 ntBASIC15.71■□□□□ 0.11
Hfm1D3Z4R1 Gm8162-201ENSMUST00000213951 665 ntBASIC15.71■□□□□ 0.11
Hfm1D3Z4R1 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Hfm1D3Z4R1 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Hfm1D3Z4R1 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hfm1D3Z4R1 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hfm1D3Z4R1 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC15.71■□□□□ 0.11
Hfm1D3Z4R1 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hfm1D3Z4R1 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hfm1D3Z4R1 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Hfm1D3Z4R1 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Hfm1D3Z4R1 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hfm1D3Z4R1 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hfm1D3Z4R1 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Hfm1D3Z4R1 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Hfm1D3Z4R1 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Hfm1D3Z4R1 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Hfm1D3Z4R1 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.7■□□□□ 0.1
Hfm1D3Z4R1 Gm20633-201ENSMUST00000176742 2831 ntBASIC15.7■□□□□ 0.1
Hfm1D3Z4R1 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Hfm1D3Z4R1 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hfm1D3Z4R1 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Hfm1D3Z4R1 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC15.7■□□□□ 0.1
Hfm1D3Z4R1 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Hfm1D3Z4R1 Gm14639-201ENSMUST00000120850 866 ntBASIC15.7■□□□□ 0.1
Hfm1D3Z4R1 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hfm1D3Z4R1 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC15.7■□□□□ 0.1
Hfm1D3Z4R1 Gm9619-201ENSMUST00000211587 762 ntBASIC15.7■□□□□ 0.1
Hfm1D3Z4R1 BX649293.1-201ENSMUST00000227437 631 ntBASIC15.7■□□□□ 0.1
Hfm1D3Z4R1 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hfm1D3Z4R1 Gm9701-201ENSMUST00000077976 427 ntBASIC15.7■□□□□ 0.1
Hfm1D3Z4R1 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hfm1D3Z4R1 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hfm1D3Z4R1 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hfm1D3Z4R1 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hfm1D3Z4R1 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hfm1D3Z4R1 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hfm1D3Z4R1 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hfm1D3Z4R1 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Hfm1D3Z4R1 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hfm1D3Z4R1 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hfm1D3Z4R1 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hfm1D3Z4R1 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hfm1D3Z4R1 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC15.7■□□□□ 0.1
Hfm1D3Z4R1 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hfm1D3Z4R1 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hfm1D3Z4R1 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hfm1D3Z4R1 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Hfm1D3Z4R1 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hfm1D3Z4R1 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Hfm1D3Z4R1 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC15.69■□□□□ 0.1
Hfm1D3Z4R1 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hfm1D3Z4R1 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC15.69■□□□□ 0.1
Hfm1D3Z4R1 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hfm1D3Z4R1 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hfm1D3Z4R1 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hfm1D3Z4R1 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Hfm1D3Z4R1 Gm44241-201ENSMUST00000203230 1662 ntBASIC15.69■□□□□ 0.1
Hfm1D3Z4R1 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Hfm1D3Z4R1 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hfm1D3Z4R1 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Hfm1D3Z4R1 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hfm1D3Z4R1 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hfm1D3Z4R1 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Hfm1D3Z4R1 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Hfm1D3Z4R1 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hfm1D3Z4R1 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hfm1D3Z4R1 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC15.69■□□□□ 0.1
Hfm1D3Z4R1 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hfm1D3Z4R1 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hfm1D3Z4R1 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hfm1D3Z4R1 Gm45124-201ENSMUST00000206723 2755 ntBASIC15.69■□□□□ 0.1
Hfm1D3Z4R1 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Hfm1D3Z4R1 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Hfm1D3Z4R1 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Hfm1D3Z4R1 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC15.69■□□□□ 0.1
Hfm1D3Z4R1 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC15.69■□□□□ 0.1
Hfm1D3Z4R1 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Hfm1D3Z4R1 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hfm1D3Z4R1 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Hfm1D3Z4R1 Gm12736-201ENSMUST00000119330 236 ntBASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 Gm12136-201ENSMUST00000120460 1209 ntBASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 Gm14148-201ENSMUST00000122433 1008 ntBASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 Gm40414-201ENSMUST00000197608 481 ntBASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 AC118639.1-202ENSMUST00000226957 653 ntBASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 AC154806.7-201ENSMUST00000227998 202 ntBASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 Gm22341-201ENSMUST00000083775 129 ntBASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 Gm37058-201ENSMUST00000193393 1644 ntBASIC15.68■□□□□ 0.1
Hfm1D3Z4R1 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms