Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Gm6218-201ENSMUST00000219812 628 ntBASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 AC133598.3-202ENSMUST00000224219 531 ntBASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 AC165148.1-201ENSMUST00000224795 2372 ntBASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Ddr1-203ENSMUST00000117301 3874 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Birc6-202ENSMUST00000180037 15768 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Zfyve26-201ENSMUST00000021547 9391 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Tsix-202ENSMUST00000211291 3263 ntTSL 5 BASIC10.17□□□□□ -0.78
Ccnb1ip1D3Z3K2 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Gm3372-201ENSMUST00000198806 1792 ntBASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Pex2-203ENSMUST00000164828 2051 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Zfp92-201ENSMUST00000033740 5767 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Rhox2-ps-201ENSMUST00000117421 322 ntBASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Gm8738-201ENSMUST00000172606 329 ntBASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Gm19412-201ENSMUST00000185388 436 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Gm33914-201ENSMUST00000214108 2150 ntTSL 5 BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Speer4b-201ENSMUST00000053257 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Zfp780b-201ENSMUST00000081618 3004 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Rab27a-201ENSMUST00000034722 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Ints6l-201ENSMUST00000039374 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Ccnb1ip1D3Z3K2 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Ccnb1ip1D3Z3K2 Dync1h1-201ENSMUST00000018851 14342 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ccnb1ip1D3Z3K2 Dmtn-203ENSMUST00000110984 4176 ntAPPRIS P2 TSL 5 BASIC10.15□□□□□ -0.78
Ccnb1ip1D3Z3K2 Tdrd1-202ENSMUST00000111604 5187 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ccnb1ip1D3Z3K2 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ccnb1ip1D3Z3K2 Phtf1os-201ENSMUST00000160110 4046 ntBASIC10.15□□□□□ -0.78
Ccnb1ip1D3Z3K2 Gk2-201ENSMUST00000059657 1880 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Ccnb1ip1D3Z3K2 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ccnb1ip1D3Z3K2 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Ccnb1ip1D3Z3K2 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Ccnb1ip1D3Z3K2 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC10.15□□□□□ -0.78
Ccnb1ip1D3Z3K2 Git2-203ENSMUST00000112183 4886 ntTSL 5 BASIC10.15□□□□□ -0.78
Ccnb1ip1D3Z3K2 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC10.15□□□□□ -0.78
Ccnb1ip1D3Z3K2 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms