Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Mir1896-201ENSMUST00000122641 81 ntBASIC9.12□□□□□ -0.95
Gm12887B1AVM1 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Gm6450-201ENSMUST00000200896 574 ntBASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Gm12887B1AVM1 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm12887B1AVM1 Bcorl1-203ENSMUST00000136348 7446 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Gm12887B1AVM1 Gm45041-201ENSMUST00000207366 3108 ntBASIC9.11□□□□□ -0.95
Gm12887B1AVM1 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm12887B1AVM1 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm12887B1AVM1 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm12887B1AVM1 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm12887B1AVM1 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Gm12887B1AVM1 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Gm12887B1AVM1 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm12887B1AVM1 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC9.11□□□□□ -0.95
Gm12887B1AVM1 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Gm12887B1AVM1 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm12887B1AVM1 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Gm12887B1AVM1 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Gm12887B1AVM1 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Gm12887B1AVM1 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Gm12887B1AVM1 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm12887B1AVM1 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Gm12887B1AVM1 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC9.11□□□□□ -0.95
Gm12887B1AVM1 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC9.11□□□□□ -0.95
Gm12887B1AVM1 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Gm12887B1AVM1 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Gm12887B1AVM1 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm12887B1AVM1 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Gm12887B1AVM1 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Gm12887B1AVM1 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC9.11□□□□□ -0.95
Gm12887B1AVM1 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC9.11□□□□□ -0.95
Gm12887B1AVM1 AC158982.1-201ENSMUST00000228377 901 ntBASIC9.11□□□□□ -0.95
Gm12887B1AVM1 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Gm12887B1AVM1 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC9.11□□□□□ -0.95
Gm12887B1AVM1 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm12887B1AVM1 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Gm12887B1AVM1 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Gm12887B1AVM1 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Gm12887B1AVM1 Gm10312-201ENSMUST00000078515 489 ntBASIC9.11□□□□□ -0.95
Gm12887B1AVM1 Gm43999-201ENSMUST00000204286 2889 ntBASIC9.11□□□□□ -0.95
Gm12887B1AVM1 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm12887B1AVM1 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Gm12887B1AVM1 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms