Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cfap99A0A140LIX9 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Cfap99A0A140LIX9 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cfap99A0A140LIX9 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cfap99A0A140LIX9 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cfap99A0A140LIX9 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cfap99A0A140LIX9 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cfap99A0A140LIX9 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cfap99A0A140LIX9 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cfap99A0A140LIX9 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cfap99A0A140LIX9 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Cfap99A0A140LIX9 Gm14892-201ENSMUST00000117636 267 ntBASIC13.57□□□□□ -0.24
Cfap99A0A140LIX9 Gm11980-201ENSMUST00000121445 986 ntBASIC13.57□□□□□ -0.24
Cfap99A0A140LIX9 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cfap99A0A140LIX9 Gm8459-201ENSMUST00000162504 760 ntBASIC13.57□□□□□ -0.24
Cfap99A0A140LIX9 Gm10807-201ENSMUST00000177134 795 ntBASIC13.57□□□□□ -0.24
Cfap99A0A140LIX9 Gm35713-201ENSMUST00000210516 199 ntBASIC13.57□□□□□ -0.24
Cfap99A0A140LIX9 Gm45758-201ENSMUST00000212448 1006 ntBASIC13.57□□□□□ -0.24
Cfap99A0A140LIX9 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC13.57□□□□□ -0.24
Cfap99A0A140LIX9 Gm5805-201ENSMUST00000072779 456 ntBASIC13.57□□□□□ -0.24
Cfap99A0A140LIX9 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Cfap99A0A140LIX9 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cfap99A0A140LIX9 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cfap99A0A140LIX9 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cfap99A0A140LIX9 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cfap99A0A140LIX9 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cfap99A0A140LIX9 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC13.57□□□□□ -0.24
Cfap99A0A140LIX9 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cfap99A0A140LIX9 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cfap99A0A140LIX9 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Cfap99A0A140LIX9 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Cfap99A0A140LIX9 Gm37849-201ENSMUST00000194722 1881 ntBASIC13.57□□□□□ -0.24
Cfap99A0A140LIX9 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cfap99A0A140LIX9 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.57□□□□□ -0.24
Cfap99A0A140LIX9 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13.56□□□□□ -0.24
Cfap99A0A140LIX9 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cfap99A0A140LIX9 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cfap99A0A140LIX9 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cfap99A0A140LIX9 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cfap99A0A140LIX9 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cfap99A0A140LIX9 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cfap99A0A140LIX9 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Cfap99A0A140LIX9 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Cfap99A0A140LIX9 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cfap99A0A140LIX9 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cfap99A0A140LIX9 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cfap99A0A140LIX9 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cfap99A0A140LIX9 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC13.56□□□□□ -0.24
Cfap99A0A140LIX9 Gm11244-201ENSMUST00000121243 237 ntBASIC13.56□□□□□ -0.24
Cfap99A0A140LIX9 n-R5s84-201ENSMUST00000122591 109 ntBASIC13.56□□□□□ -0.24
Cfap99A0A140LIX9 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cfap99A0A140LIX9 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cfap99A0A140LIX9 Gm17798-201ENSMUST00000182282 1035 ntBASIC13.56□□□□□ -0.24
Cfap99A0A140LIX9 Gm9135-201ENSMUST00000182963 990 ntBASIC13.56□□□□□ -0.24
Cfap99A0A140LIX9 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC13.56□□□□□ -0.24
Cfap99A0A140LIX9 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC13.56□□□□□ -0.24
Cfap99A0A140LIX9 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC13.56□□□□□ -0.24
Cfap99A0A140LIX9 Gm9111-201ENSMUST00000219394 709 ntBASIC13.56□□□□□ -0.24
Cfap99A0A140LIX9 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cfap99A0A140LIX9 Gm8420-201ENSMUST00000097103 598 ntBASIC13.56□□□□□ -0.24
Cfap99A0A140LIX9 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cfap99A0A140LIX9 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Cfap99A0A140LIX9 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cfap99A0A140LIX9 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cfap99A0A140LIX9 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC13.56□□□□□ -0.24
Cfap99A0A140LIX9 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC13.56□□□□□ -0.24
Cfap99A0A140LIX9 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.56□□□□□ -0.24
Cfap99A0A140LIX9 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cfap99A0A140LIX9 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cfap99A0A140LIX9 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC13.56□□□□□ -0.24
Cfap99A0A140LIX9 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cfap99A0A140LIX9 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cfap99A0A140LIX9 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cfap99A0A140LIX9 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cfap99A0A140LIX9 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.55□□□□□ -0.24
Cfap99A0A140LIX9 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cfap99A0A140LIX9 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Cfap99A0A140LIX9 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cfap99A0A140LIX9 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cfap99A0A140LIX9 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Cfap99A0A140LIX9 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC13.55□□□□□ -0.24
Cfap99A0A140LIX9 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cfap99A0A140LIX9 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC13.55□□□□□ -0.24
Cfap99A0A140LIX9 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC13.55□□□□□ -0.24
Cfap99A0A140LIX9 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Cfap99A0A140LIX9 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cfap99A0A140LIX9 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cfap99A0A140LIX9 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Cfap99A0A140LIX9 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cfap99A0A140LIX9 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cfap99A0A140LIX9 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Cfap99A0A140LIX9 Gm12816-201ENSMUST00000118069 1212 ntBASIC13.55□□□□□ -0.24
Cfap99A0A140LIX9 Gm12969-201ENSMUST00000120199 1004 ntBASIC13.55□□□□□ -0.24
Cfap99A0A140LIX9 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC13.55□□□□□ -0.24
Cfap99A0A140LIX9 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Cfap99A0A140LIX9 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC13.55□□□□□ -0.24
Cfap99A0A140LIX9 Gm18059-201ENSMUST00000208073 580 ntBASIC13.55□□□□□ -0.24
Cfap99A0A140LIX9 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC13.55□□□□□ -0.24
Cfap99A0A140LIX9 CT009546.1-201ENSMUST00000222573 1120 ntBASIC13.55□□□□□ -0.24
Cfap99A0A140LIX9 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms