Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Chaf1aQ9QWF0 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chaf1aQ9QWF0 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chaf1aQ9QWF0 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chaf1aQ9QWF0 Gm14071-201ENSMUST00000117817 509 ntBASIC12.73□□□□□ -0.37
Chaf1aQ9QWF0 Gm13665-201ENSMUST00000120830 528 ntBASIC12.73□□□□□ -0.37
Chaf1aQ9QWF0 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.73□□□□□ -0.37
Chaf1aQ9QWF0 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.73□□□□□ -0.37
Chaf1aQ9QWF0 Gm26361-201ENSMUST00000158868 186 ntBASIC12.73□□□□□ -0.37
Chaf1aQ9QWF0 Gm25890-201ENSMUST00000177643 165 ntBASIC12.73□□□□□ -0.37
Chaf1aQ9QWF0 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Chaf1aQ9QWF0 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.73□□□□□ -0.37
Chaf1aQ9QWF0 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.73□□□□□ -0.37
Chaf1aQ9QWF0 Gm22614-201ENSMUST00000178300 165 ntBASIC12.73□□□□□ -0.37
Chaf1aQ9QWF0 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.73□□□□□ -0.37
Chaf1aQ9QWF0 Gm37666-201ENSMUST00000194110 866 ntBASIC12.73□□□□□ -0.37
Chaf1aQ9QWF0 Gm5982-201ENSMUST00000196234 512 ntBASIC12.73□□□□□ -0.37
Chaf1aQ9QWF0 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chaf1aQ9QWF0 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chaf1aQ9QWF0 Gm22042-201ENSMUST00000082989 165 ntBASIC12.73□□□□□ -0.37
Chaf1aQ9QWF0 Gm26110-201ENSMUST00000083971 165 ntBASIC12.73□□□□□ -0.37
Chaf1aQ9QWF0 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chaf1aQ9QWF0 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Chaf1aQ9QWF0 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chaf1aQ9QWF0 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chaf1aQ9QWF0 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chaf1aQ9QWF0 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chaf1aQ9QWF0 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chaf1aQ9QWF0 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chaf1aQ9QWF0 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chaf1aQ9QWF0 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chaf1aQ9QWF0 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chaf1aQ9QWF0 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Chaf1aQ9QWF0 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chaf1aQ9QWF0 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chaf1aQ9QWF0 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Adgrv1-214ENSMUST00000224088 1492 ntBASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 AC154537.1-201ENSMUST00000226101 1304 ntBASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Gm24749-201ENSMUST00000157838 343 ntBASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Gm29615-201ENSMUST00000185371 697 ntBASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Gm28224-201ENSMUST00000186078 697 ntBASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Gm29001-201ENSMUST00000186177 697 ntBASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Gm28292-201ENSMUST00000186593 697 ntBASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Gm28101-201ENSMUST00000187608 697 ntBASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Gm29076-201ENSMUST00000187689 697 ntBASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Gm28302-201ENSMUST00000187931 697 ntBASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Gm28646-201ENSMUST00000188220 697 ntBASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Gm28205-201ENSMUST00000189177 697 ntBASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Gm29032-201ENSMUST00000189797 697 ntBASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Gm28695-201ENSMUST00000190300 697 ntBASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Gm37448-201ENSMUST00000192795 697 ntBASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Gm2553-201ENSMUST00000215986 605 ntBASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chaf1aQ9QWF0 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chaf1aQ9QWF0 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chaf1aQ9QWF0 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms