Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm4811-201ENSMUST00000220879 1220 ntBASIC13.55□□□□□ -0.24
Ube3bQ9ES34 AC132901.1-201ENSMUST00000224345 508 ntBASIC13.55□□□□□ -0.24
Ube3bQ9ES34 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube3bQ9ES34 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube3bQ9ES34 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube3bQ9ES34 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube3bQ9ES34 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Ube3bQ9ES34 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube3bQ9ES34 Gm37931-201ENSMUST00000194686 2866 ntBASIC13.55□□□□□ -0.24
Ube3bQ9ES34 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube3bQ9ES34 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube3bQ9ES34 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Ube3bQ9ES34 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube3bQ9ES34 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube3bQ9ES34 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ube3bQ9ES34 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube3bQ9ES34 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Ube3bQ9ES34 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube3bQ9ES34 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC13.54□□□□□ -0.24
Ube3bQ9ES34 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ube3bQ9ES34 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Ube3bQ9ES34 Gm43152-201ENSMUST00000202495 1638 ntBASIC13.54□□□□□ -0.24
Ube3bQ9ES34 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ube3bQ9ES34 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ube3bQ9ES34 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ube3bQ9ES34 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC13.54□□□□□ -0.24
Ube3bQ9ES34 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ube3bQ9ES34 Gm12274-201ENSMUST00000120062 385 ntBASIC13.54□□□□□ -0.24
Ube3bQ9ES34 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ube3bQ9ES34 Gm10169-201ENSMUST00000121822 348 ntBASIC13.54□□□□□ -0.24
Ube3bQ9ES34 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC13.54□□□□□ -0.24
Ube3bQ9ES34 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ube3bQ9ES34 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ube3bQ9ES34 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ube3bQ9ES34 Gm25026-201ENSMUST00000175017 188 ntBASIC13.54□□□□□ -0.24
Ube3bQ9ES34 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ube3bQ9ES34 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC13.54□□□□□ -0.24
Ube3bQ9ES34 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ube3bQ9ES34 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Ube3bQ9ES34 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ube3bQ9ES34 Gm3017-201ENSMUST00000203603 1126 ntBASIC13.54□□□□□ -0.24
Ube3bQ9ES34 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ube3bQ9ES34 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC13.54□□□□□ -0.24
Ube3bQ9ES34 AC153152.3-201ENSMUST00000222188 1135 ntBASIC13.54□□□□□ -0.24
Ube3bQ9ES34 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ube3bQ9ES34 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ube3bQ9ES34 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Ube3bQ9ES34 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.54□□□□□ -0.24
Ube3bQ9ES34 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Ube3bQ9ES34 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ube3bQ9ES34 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ube3bQ9ES34 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ube3bQ9ES34 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ube3bQ9ES34 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ube3bQ9ES34 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ube3bQ9ES34 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ube3bQ9ES34 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ube3bQ9ES34 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ube3bQ9ES34 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.54□□□□□ -0.24
Ube3bQ9ES34 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ube3bQ9ES34 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ube3bQ9ES34 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ube3bQ9ES34 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube3bQ9ES34 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube3bQ9ES34 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Ube3bQ9ES34 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube3bQ9ES34 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube3bQ9ES34 AC167565.1-201ENSMUST00000226980 1833 ntBASIC13.53□□□□□ -0.24
Ube3bQ9ES34 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube3bQ9ES34 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ube3bQ9ES34 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Ube3bQ9ES34 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC13.53□□□□□ -0.24
Ube3bQ9ES34 Gm9133-201ENSMUST00000118289 540 ntBASIC13.53□□□□□ -0.24
Ube3bQ9ES34 Gm13284-201ENSMUST00000121020 547 ntBASIC13.53□□□□□ -0.24
Ube3bQ9ES34 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC13.53□□□□□ -0.24
Ube3bQ9ES34 Gm25072-201ENSMUST00000175233 235 ntBASIC13.53□□□□□ -0.24
Ube3bQ9ES34 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ube3bQ9ES34 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube3bQ9ES34 Gm37293-201ENSMUST00000191658 295 ntBASIC13.53□□□□□ -0.24
Ube3bQ9ES34 Gm38210-201ENSMUST00000191944 809 ntBASIC13.53□□□□□ -0.24
Ube3bQ9ES34 Gm38170-201ENSMUST00000195404 816 ntBASIC13.53□□□□□ -0.24
Ube3bQ9ES34 Gm45592-201ENSMUST00000209605 1043 ntBASIC13.53□□□□□ -0.24
Ube3bQ9ES34 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC13.53□□□□□ -0.24
Ube3bQ9ES34 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC13.53□□□□□ -0.24
Ube3bQ9ES34 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC13.53□□□□□ -0.24
Ube3bQ9ES34 CT009536.2-201ENSMUST00000225370 665 ntBASIC13.53□□□□□ -0.24
Ube3bQ9ES34 AC122035.1-201ENSMUST00000227576 1016 ntBASIC13.53□□□□□ -0.24
Ube3bQ9ES34 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube3bQ9ES34 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube3bQ9ES34 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Ube3bQ9ES34 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC13.53□□□□□ -0.24
Ube3bQ9ES34 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ube3bQ9ES34 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube3bQ9ES34 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube3bQ9ES34 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ube3bQ9ES34 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube3bQ9ES34 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube3bQ9ES34 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube3bQ9ES34 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ube3bQ9ES34 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms