Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cpne8Q9DC53 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cpne8Q9DC53 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cpne8Q9DC53 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Gm14740-201ENSMUST00000118538 1150 ntBASIC11.8□□□□□ -0.52
Cpne8Q9DC53 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Gm8574-201ENSMUST00000203207 924 ntBASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Mir433-201ENSMUST00000093564 124 ntBASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Olfr584-201ENSMUST00000098210 964 ntBASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpne8Q9DC53 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.79□□□□□ -0.52
Cpne8Q9DC53 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpne8Q9DC53 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Cpne8Q9DC53 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cpne8Q9DC53 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpne8Q9DC53 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpne8Q9DC53 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.79□□□□□ -0.52
Cpne8Q9DC53 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpne8Q9DC53 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Cpne8Q9DC53 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpne8Q9DC53 AA474408-201ENSMUST00000098110 3339 ntBASIC11.79□□□□□ -0.52
Cpne8Q9DC53 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpne8Q9DC53 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpne8Q9DC53 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpne8Q9DC53 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpne8Q9DC53 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpne8Q9DC53 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpne8Q9DC53 Gm12419-201ENSMUST00000116649 636 ntBASIC11.79□□□□□ -0.52
Cpne8Q9DC53 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpne8Q9DC53 Gm26047-201ENSMUST00000157308 113 ntBASIC11.79□□□□□ -0.52
Cpne8Q9DC53 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpne8Q9DC53 Gm29499-201ENSMUST00000189151 486 ntBASIC11.79□□□□□ -0.52
Cpne8Q9DC53 Gm28329-201ENSMUST00000191208 689 ntBASIC11.79□□□□□ -0.52
Cpne8Q9DC53 Gm29171-201ENSMUST00000191397 486 ntBASIC11.79□□□□□ -0.52
Cpne8Q9DC53 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cpne8Q9DC53 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cpne8Q9DC53 Gm26047-202ENSMUST00000198840 115 ntBASIC11.79□□□□□ -0.52
Cpne8Q9DC53 Gm6108-201ENSMUST00000208365 367 ntBASIC11.79□□□□□ -0.52
Cpne8Q9DC53 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.79□□□□□ -0.52
Cpne8Q9DC53 CT025602.2-201ENSMUST00000226553 772 ntBASIC11.79□□□□□ -0.52
Cpne8Q9DC53 Gm1821-202ENSMUST00000227415 750 ntBASIC11.79□□□□□ -0.52
Cpne8Q9DC53 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpne8Q9DC53 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpne8Q9DC53 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Cpne8Q9DC53 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cpne8Q9DC53 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpne8Q9DC53 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms