Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp4bQ9D8B3 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp4bQ9D8B3 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp4bQ9D8B3 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp4bQ9D8B3 Nudt13-207ENSMUST00000224311 1574 ntBASIC14.34□□□□□ -0.11
Chmp4bQ9D8B3 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp4bQ9D8B3 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp4bQ9D8B3 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Chmp4bQ9D8B3 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chmp4bQ9D8B3 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Chmp4bQ9D8B3 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp4bQ9D8B3 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp4bQ9D8B3 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Chmp4bQ9D8B3 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp4bQ9D8B3 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp4bQ9D8B3 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp4bQ9D8B3 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Chmp4bQ9D8B3 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Chmp4bQ9D8B3 AC124433.1-202ENSMUST00000224762 1535 ntBASIC14.33□□□□□ -0.12
Chmp4bQ9D8B3 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp4bQ9D8B3 Gm15617-201ENSMUST00000118973 771 ntBASIC14.33□□□□□ -0.12
Chmp4bQ9D8B3 Gm6506-201ENSMUST00000119775 1136 ntBASIC14.33□□□□□ -0.12
Chmp4bQ9D8B3 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC14.33□□□□□ -0.12
Chmp4bQ9D8B3 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp4bQ9D8B3 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC14.33□□□□□ -0.12
Chmp4bQ9D8B3 Gm37835-201ENSMUST00000193305 361 ntBASIC14.33□□□□□ -0.12
Chmp4bQ9D8B3 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC14.33□□□□□ -0.12
Chmp4bQ9D8B3 Gm9353-201ENSMUST00000200472 604 ntBASIC14.33□□□□□ -0.12
Chmp4bQ9D8B3 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Chmp4bQ9D8B3 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp4bQ9D8B3 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Chmp4bQ9D8B3 Gm35850-202ENSMUST00000211705 2120 ntBASIC14.33□□□□□ -0.12
Chmp4bQ9D8B3 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp4bQ9D8B3 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp4bQ9D8B3 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp4bQ9D8B3 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Chmp4bQ9D8B3 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC14.33□□□□□ -0.12
Chmp4bQ9D8B3 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp4bQ9D8B3 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp4bQ9D8B3 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Chmp4bQ9D8B3 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC14.33□□□□□ -0.12
Chmp4bQ9D8B3 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Chmp4bQ9D8B3 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp4bQ9D8B3 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp4bQ9D8B3 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp4bQ9D8B3 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp4bQ9D8B3 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC14.32□□□□□ -0.12
Chmp4bQ9D8B3 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp4bQ9D8B3 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp4bQ9D8B3 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Chmp4bQ9D8B3 Gm9089-201ENSMUST00000122027 526 ntBASIC14.32□□□□□ -0.12
Chmp4bQ9D8B3 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Chmp4bQ9D8B3 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC14.32□□□□□ -0.12
Chmp4bQ9D8B3 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC14.32□□□□□ -0.12
Chmp4bQ9D8B3 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp4bQ9D8B3 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC14.32□□□□□ -0.12
Chmp4bQ9D8B3 AC141438.2-201ENSMUST00000215068 271 ntBASIC14.32□□□□□ -0.12
Chmp4bQ9D8B3 Gm2517-201ENSMUST00000215651 348 ntBASIC14.32□□□□□ -0.12
Chmp4bQ9D8B3 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Chmp4bQ9D8B3 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Chmp4bQ9D8B3 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp4bQ9D8B3 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC14.32□□□□□ -0.12
Chmp4bQ9D8B3 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp4bQ9D8B3 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp4bQ9D8B3 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp4bQ9D8B3 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp4bQ9D8B3 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp4bQ9D8B3 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp4bQ9D8B3 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC14.32□□□□□ -0.12
Chmp4bQ9D8B3 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp4bQ9D8B3 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC14.32□□□□□ -0.12
Chmp4bQ9D8B3 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp4bQ9D8B3 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Chmp4bQ9D8B3 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp4bQ9D8B3 AC125374.1-201ENSMUST00000213573 1400 ntBASIC14.32□□□□□ -0.12
Chmp4bQ9D8B3 Gm5171-201ENSMUST00000214944 1415 ntBASIC14.32□□□□□ -0.12
Chmp4bQ9D8B3 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Chmp4bQ9D8B3 CT009489.1-201ENSMUST00000227740 1893 ntBASIC14.31□□□□□ -0.12
Chmp4bQ9D8B3 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp4bQ9D8B3 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Chmp4bQ9D8B3 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp4bQ9D8B3 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp4bQ9D8B3 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp4bQ9D8B3 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp4bQ9D8B3 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp4bQ9D8B3 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp4bQ9D8B3 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp4bQ9D8B3 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp4bQ9D8B3 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Chmp4bQ9D8B3 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp4bQ9D8B3 Gm16219-201ENSMUST00000120096 274 ntBASIC14.31□□□□□ -0.12
Chmp4bQ9D8B3 Gm11244-201ENSMUST00000121243 237 ntBASIC14.31□□□□□ -0.12
Chmp4bQ9D8B3 Gm15549-201ENSMUST00000121595 622 ntBASIC14.31□□□□□ -0.12
Chmp4bQ9D8B3 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC14.31□□□□□ -0.12
Chmp4bQ9D8B3 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC14.31□□□□□ -0.12
Chmp4bQ9D8B3 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC14.31□□□□□ -0.12
Chmp4bQ9D8B3 Gm7504-201ENSMUST00000201449 424 ntBASIC14.31□□□□□ -0.12
Chmp4bQ9D8B3 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Chmp4bQ9D8B3 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Chmp4bQ9D8B3 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms