Protein–RNA interactions for Protein: Q9D7U6

Cldn22, Claudin-22, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn22Q9D7U6 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 Gm9035-201ENSMUST00000218318 1697 ntBASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn22Q9D7U6 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn22Q9D7U6 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn22Q9D7U6 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn22Q9D7U6 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn22Q9D7U6 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn22Q9D7U6 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.44□□□□□ -0.58
Cldn22Q9D7U6 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn22Q9D7U6 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn22Q9D7U6 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.44□□□□□ -0.58
Cldn22Q9D7U6 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.44□□□□□ -0.58
Cldn22Q9D7U6 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn22Q9D7U6 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn22Q9D7U6 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn22Q9D7U6 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn22Q9D7U6 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Cldn22Q9D7U6 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn22Q9D7U6 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC11.44□□□□□ -0.58
Cldn22Q9D7U6 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.44□□□□□ -0.58
Cldn22Q9D7U6 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn22Q9D7U6 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Cldn22Q9D7U6 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC11.44□□□□□ -0.58
Cldn22Q9D7U6 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn22Q9D7U6 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.44□□□□□ -0.58
Cldn22Q9D7U6 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn22Q9D7U6 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn22Q9D7U6 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.44□□□□□ -0.58
Cldn22Q9D7U6 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn22Q9D7U6 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Cldn22Q9D7U6 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC11.44□□□□□ -0.58
Cldn22Q9D7U6 Gm17831-201ENSMUST00000205579 900 ntBASIC11.44□□□□□ -0.58
Cldn22Q9D7U6 Gm44551-201ENSMUST00000208804 171 ntBASIC11.44□□□□□ -0.58
Cldn22Q9D7U6 Gm18974-201ENSMUST00000221478 1031 ntBASIC11.44□□□□□ -0.58
Cldn22Q9D7U6 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.44□□□□□ -0.58
Cldn22Q9D7U6 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Cldn22Q9D7U6 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn22Q9D7U6 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.44□□□□□ -0.58
Cldn22Q9D7U6 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn22Q9D7U6 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn22Q9D7U6 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn22Q9D7U6 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Cldn22Q9D7U6 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn22Q9D7U6 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn22Q9D7U6 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn22Q9D7U6 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Cldn22Q9D7U6 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn22Q9D7U6 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cldn22Q9D7U6 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Cldn22Q9D7U6 AC158355.1-201ENSMUST00000215895 1705 ntBASIC11.43□□□□□ -0.58
Cldn22Q9D7U6 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC11.43□□□□□ -0.58
Cldn22Q9D7U6 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cldn22Q9D7U6 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cldn22Q9D7U6 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cldn22Q9D7U6 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cldn22Q9D7U6 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cldn22Q9D7U6 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cldn22Q9D7U6 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cldn22Q9D7U6 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Cldn22Q9D7U6 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cldn22Q9D7U6 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cldn22Q9D7U6 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cldn22Q9D7U6 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.43□□□□□ -0.58
Cldn22Q9D7U6 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Cldn22Q9D7U6 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cldn22Q9D7U6 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Cldn22Q9D7U6 Gm14460-201ENSMUST00000121511 639 ntBASIC11.43□□□□□ -0.58
Cldn22Q9D7U6 Gm14665-201ENSMUST00000122294 557 ntBASIC11.43□□□□□ -0.58
Cldn22Q9D7U6 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.43□□□□□ -0.58
Cldn22Q9D7U6 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.43□□□□□ -0.58
Cldn22Q9D7U6 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC11.43□□□□□ -0.58
Cldn22Q9D7U6 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.43□□□□□ -0.58
Cldn22Q9D7U6 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC11.43□□□□□ -0.58
Cldn22Q9D7U6 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.43□□□□□ -0.58
Cldn22Q9D7U6 Mir8115-201ENSMUST00000184992 119 ntBASIC11.43□□□□□ -0.58
Cldn22Q9D7U6 Gm9540-201ENSMUST00000188230 478 ntBASIC11.43□□□□□ -0.58
Cldn22Q9D7U6 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cldn22Q9D7U6 Gm6439-201ENSMUST00000199849 862 ntBASIC11.43□□□□□ -0.58
Cldn22Q9D7U6 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.43□□□□□ -0.58
Cldn22Q9D7U6 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC11.43□□□□□ -0.58
Cldn22Q9D7U6 Gm45398-201ENSMUST00000210561 165 ntBASIC11.43□□□□□ -0.58
Cldn22Q9D7U6 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.43□□□□□ -0.58
Cldn22Q9D7U6 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cldn22Q9D7U6 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cldn22Q9D7U6 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Cldn22Q9D7U6 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Cldn22Q9D7U6 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Cldn22Q9D7U6 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Cldn22Q9D7U6 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms