Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3a3Q9D554 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3a3Q9D554 Ptk2b-202ENSMUST00000089250 3903 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3a3Q9D554 Dchs2-201ENSMUST00000191829 10783 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Sf3a3Q9D554 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Sf3a3Q9D554 Aen-203ENSMUST00000107425 4956 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3a3Q9D554 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3a3Q9D554 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.42□□□□□ -0.58
Sf3a3Q9D554 Fut10-201ENSMUST00000066173 3183 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3a3Q9D554 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3a3Q9D554 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3a3Q9D554 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3a3Q9D554 Slc35c1-201ENSMUST00000067631 3139 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Sf3a3Q9D554 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Sf3a3Q9D554 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sf3a3Q9D554 Pde2a-204ENSMUST00000209537 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sf3a3Q9D554 Exoc7-203ENSMUST00000106413 3298 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Sf3a3Q9D554 Rasal1-205ENSMUST00000156722 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sf3a3Q9D554 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sf3a3Q9D554 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sf3a3Q9D554 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sf3a3Q9D554 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sf3a3Q9D554 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sf3a3Q9D554 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sf3a3Q9D554 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sf3a3Q9D554 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Sf3a3Q9D554 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.41□□□□□ -0.58
Sf3a3Q9D554 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC11.41□□□□□ -0.58
Sf3a3Q9D554 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sf3a3Q9D554 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.41□□□□□ -0.58
Sf3a3Q9D554 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.41□□□□□ -0.58
Sf3a3Q9D554 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.41□□□□□ -0.58
Sf3a3Q9D554 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.41□□□□□ -0.58
Sf3a3Q9D554 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sf3a3Q9D554 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC11.41□□□□□ -0.58
Sf3a3Q9D554 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Sf3a3Q9D554 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sf3a3Q9D554 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sf3a3Q9D554 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sf3a3Q9D554 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
Sf3a3Q9D554 Rassf2-201ENSMUST00000028814 8233 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sf3a3Q9D554 Zfp512-201ENSMUST00000076264 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sf3a3Q9D554 Gm44888-201ENSMUST00000209119 2541 ntBASIC11.41□□□□□ -0.58
Sf3a3Q9D554 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sf3a3Q9D554 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sf3a3Q9D554 Epc1-201ENSMUST00000028100 3965 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sf3a3Q9D554 D630003M21Rik-202ENSMUST00000103121 4521 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sf3a3Q9D554 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sf3a3Q9D554 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.41□□□□□ -0.58
Sf3a3Q9D554 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.4□□□□□ -0.58
Sf3a3Q9D554 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Sf3a3Q9D554 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Sf3a3Q9D554 Fgf14-201ENSMUST00000026631 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3a3Q9D554 Exoc7-201ENSMUST00000021147 3337 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3a3Q9D554 Lhx9-201ENSMUST00000019374 4937 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3a3Q9D554 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3a3Q9D554 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3a3Q9D554 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3a3Q9D554 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3a3Q9D554 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3a3Q9D554 AC122382.1-201ENSMUST00000225869 2371 ntBASIC11.4□□□□□ -0.58
Sf3a3Q9D554 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3a3Q9D554 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3a3Q9D554 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3a3Q9D554 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Sf3a3Q9D554 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3a3Q9D554 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3a3Q9D554 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC11.4□□□□□ -0.58
Sf3a3Q9D554 9130019O22Rik-201ENSMUST00000049052 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3a3Q9D554 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3a3Q9D554 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3a3Q9D554 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3a3Q9D554 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.4□□□□□ -0.58
Sf3a3Q9D554 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.4□□□□□ -0.58
Sf3a3Q9D554 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.4□□□□□ -0.58
Sf3a3Q9D554 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3a3Q9D554 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Sf3a3Q9D554 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.4□□□□□ -0.58
Sf3a3Q9D554 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3a3Q9D554 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3a3Q9D554 Uba52-ps-201ENSMUST00000183770 379 ntBASIC11.4□□□□□ -0.58
Sf3a3Q9D554 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.4□□□□□ -0.58
Sf3a3Q9D554 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3a3Q9D554 Gm40466-201ENSMUST00000212174 422 ntBASIC11.4□□□□□ -0.58
Sf3a3Q9D554 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3a3Q9D554 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3a3Q9D554 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3a3Q9D554 Gm10425-201ENSMUST00000181085 3364 ntTSL 2 BASIC11.4□□□□□ -0.58
Sf3a3Q9D554 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3a3Q9D554 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Sf3a3Q9D554 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3a3Q9D554 Clcn1-201ENSMUST00000031894 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sf3a3Q9D554 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Sf3a3Q9D554 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sf3a3Q9D554 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sf3a3Q9D554 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sf3a3Q9D554 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Sf3a3Q9D554 Mid1-201ENSMUST00000036753 3753 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Sf3a3Q9D554 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sf3a3Q9D554 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms