Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 CK137956-201ENSMUST00000030614 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 Ints6l-201ENSMUST00000039374 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.44□□□□□ -0.58
Trim42Q9D2H5 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim42Q9D2H5 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trim42Q9D2H5 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Trim42Q9D2H5 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim42Q9D2H5 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim42Q9D2H5 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim42Q9D2H5 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC11.43□□□□□ -0.58
Trim42Q9D2H5 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.43□□□□□ -0.58
Trim42Q9D2H5 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
Trim42Q9D2H5 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim42Q9D2H5 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Trim42Q9D2H5 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim42Q9D2H5 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim42Q9D2H5 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim42Q9D2H5 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC11.43□□□□□ -0.58
Trim42Q9D2H5 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trim42Q9D2H5 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trim42Q9D2H5 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim42Q9D2H5 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.43□□□□□ -0.58
Trim42Q9D2H5 Gm25261-201ENSMUST00000157416 134 ntBASIC11.43□□□□□ -0.58
Trim42Q9D2H5 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.43□□□□□ -0.58
Trim42Q9D2H5 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim42Q9D2H5 Gm2546-201ENSMUST00000182630 991 ntBASIC11.43□□□□□ -0.58
Trim42Q9D2H5 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.43□□□□□ -0.58
Trim42Q9D2H5 Gm40466-201ENSMUST00000212174 422 ntBASIC11.43□□□□□ -0.58
Trim42Q9D2H5 CT010431.1-201ENSMUST00000221249 1080 ntBASIC11.43□□□□□ -0.58
Trim42Q9D2H5 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim42Q9D2H5 A1cf-201ENSMUST00000075838 2989 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim42Q9D2H5 Gm10702-201ENSMUST00000098929 1268 ntBASIC11.43□□□□□ -0.58
Trim42Q9D2H5 Grb10-202ENSMUST00000109653 2048 ntTSL 5 BASIC11.43□□□□□ -0.58
Trim42Q9D2H5 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim42Q9D2H5 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim42Q9D2H5 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Trim42Q9D2H5 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim42Q9D2H5 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Trim42Q9D2H5 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim42Q9D2H5 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim42Q9D2H5 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim42Q9D2H5 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim42Q9D2H5 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Trim42Q9D2H5 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.42□□□□□ -0.58
Trim42Q9D2H5 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim42Q9D2H5 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.42□□□□□ -0.58
Trim42Q9D2H5 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim42Q9D2H5 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim42Q9D2H5 Spata33-207ENSMUST00000212760 4074 ntBASIC11.42□□□□□ -0.58
Trim42Q9D2H5 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim42Q9D2H5 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.42□□□□□ -0.58
Trim42Q9D2H5 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim42Q9D2H5 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim42Q9D2H5 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim42Q9D2H5 AC114008.2-201ENSMUST00000227699 1347 ntBASIC11.42□□□□□ -0.58
Trim42Q9D2H5 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trim42Q9D2H5 Gm42602-201ENSMUST00000200288 3224 ntBASIC11.42□□□□□ -0.58
Trim42Q9D2H5 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trim42Q9D2H5 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trim42Q9D2H5 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim42Q9D2H5 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim42Q9D2H5 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim42Q9D2H5 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.42□□□□□ -0.58
Trim42Q9D2H5 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.42□□□□□ -0.58
Trim42Q9D2H5 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.42□□□□□ -0.58
Trim42Q9D2H5 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.42□□□□□ -0.58
Trim42Q9D2H5 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.42□□□□□ -0.58
Trim42Q9D2H5 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trim42Q9D2H5 Gm19080-201ENSMUST00000196082 550 ntBASIC11.42□□□□□ -0.58
Trim42Q9D2H5 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trim42Q9D2H5 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim42Q9D2H5 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.42□□□□□ -0.58
Trim42Q9D2H5 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim42Q9D2H5 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim42Q9D2H5 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim42Q9D2H5 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim42Q9D2H5 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC11.42□□□□□ -0.58
Trim42Q9D2H5 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim42Q9D2H5 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trim42Q9D2H5 Nek4-203ENSMUST00000226551 4098 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
Trim42Q9D2H5 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim42Q9D2H5 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim42Q9D2H5 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim42Q9D2H5 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trim42Q9D2H5 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms